Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is pheT [H]
Identifier: 118479707
GI number: 118479707
Start: 4362008
End: 4364428
Strand: Reverse
Name: pheT [H]
Synonym: BALH_4141
Alternate gene names: 118479707
Gene position: 4364428-4362008 (Counterclockwise)
Preceding gene: 162382771
Following gene: 162382772
Centisome position: 83.02
GC content: 39.78
Gene sequence:
>2421_bases ATGTTCGTATCATATCGTTGGTTACAAGAGTATGTAGATATTAAAGATGTAACAGCACAAGAACTAGCAGACAAAATCAC GAAGAGTGGTATTGAAGTAGAAGGTGTTGAAGTATTAAATAAAGGTGTAAAAGGTGTTGTAGTTGGTCACGTATTAGAAT GTGAAAAACACCCAGAAGCTGATAAATTAAGCAAATGCTTAATCGATATCGGTGAAGAAGAGCCAGTTCAGATTATTTGT GGTGCTGCTAACATTGCAAAAGGTTTAAAAGTACCAGTTGCAAAAGTTGGTGCTGTACTTCCTGGCAACTTCAAAATTAA AAAAGCAAAACTACGTGGTGAAGCTTCTCACGGTATGGTTTGTGCTCTTCAAGAGCTTGGTATTGATGGAAAGTTAGTTT CAAAAGAATACGCAGATGGTATCTTCATCTTCCCAAGTGACGCTGAAGTTGGTGCGGATGCACTTGAAATTTTAAACTTA CATGATGAAGTACTTGAGCTTGGTTTAACACCAAACCGTGCAGATTGCTTAAATATGTTAGGTGTTGCATATGAAGTAGC TGCTATTTACGGCCGCGAAGTAAAACTTCCAGCTATCGACTTACAAGAAACAGCAGAAAAAACTTCTGATTACATTTCTG TAAGTGTAGAAGCGAAAGAAGAAAACCCATTATACATTGCAAAAATGGTGAAGAACGTAAAAATTGGTCCATCACCAATG TGGATGCAAACTCGCCTAATGGCAGCTGGCATTCGTCCGATTAGCAACGTAGTTGATATTACAAACTACATTTTAATGGA ATACGGTCAACCGTTACATGCATTTGATTACGATAAATTAGGTTCAAAAGAAATCGTTGTTCGTCTTGCAAAAGAAGGCG AAAAAATTGAAACGTTAGATGATCAAGAACGTACGTTACAAGAGCACCACCTTGTAATTACAAACGGAACAAAAGCTTTA GCTGTTGCTGGTGTAATGGGCGGAGCGGATTCAGAAGTTACAAACGAGACAGTAAACGTTTTAATTGAATCTGCATACTT TGCGGGTCAAACAGTACGTCGTACATCAAAAGACTTAGGTCTTCGCAGTGAATCAAGTGCACGTTTCGAAAAAGGAATCG ACCCAACACGTACGTTTGAAGCAATTCAACACGCAGCTGCTTTAATGGCGAAATACGCTGGCGGAGAAGCGCTTGAAGGT GTAGTAGAAGCTGACAACTTACAAGTACAAGAGCGTACAGTATCTGTTACTGCAGAAAAAGTAAACCGTGTATTAGGTAC AAATATTTCTGCAAGTGAAATGGGTACAATGTTCACAAACTTAAAATTCCCATTTACAGAAGTAGAAGGAACATTCCATG TGAATGTACCAGCACGTCGTCCTGACATTACAATTTCAGAAGACTTAGTAGAAGAAGTGGGTCGCCTATACGGTTATGAC CACATTCCAGTTACATTACCTTCTGGAACAATGACTCGTGGTAAATTAACAGCAGCACAAACGAAACGTCGTAAAGTACG TCGCTTCTTAGAAGGCGCTGGTTTATATGAAGCAATCACATATTCATTAACAAGCGCTGACAAAGCGAAACAATATATGG TTGAGCCAAACGAAAAGGCGCCTGTAAACCTTGCACTTCCAATGAGTGAAGAGCGTAGCCAACTTCGTTTAAGCTTAGTT CCACAATTGTTAGAAGCAGTTTCATACAATGTTGCTCGTAAAAACGACAGCGTTGCTTTATACGAAGTAGGTTCTATCTT CTTACCGACAGAAGCAGGAGAACTTCCGAAAGAAGAACAACATCTTGCAGGTGTTATGACAGGTCTTGCTCTTCACCATG CATGGCAAGGTGAGAAAAAAGTAGTAGATTTCTTCGTTGTGAAAGGTGTACTAGAAGGACTATTTGACGTACTTGGCGTT TCAAACCAAATCACATATGCACCAGCAAAACGTGAAGGTATGCATCCAGGTCGTACAGCTGACATCGTATTAGATGGCGA AGTAATTGGTTATATCGGTCAATTGCACCCAGAAGCAGAAAAACAATTAGATGTGAAAAATACATTCGTATTCGAACTAT CTCTTGTAAAAGTATTCGGTACAGACGCAGAAGAAACTTACTACTCAGCAATTCCACGTTTCCCATCTATGACACGTGAT ATGGCTGTTGTCGTAACGAAAGAAACAAAAGCTGGCGAAATGAAGCAAGTTATTGCTGAAGCTGGTGGAGAACTGCTGAA AGACGTAACGCTGTTTGACTTATACGAAGGTGAAAAAATGGAAGAAGGCAAGAAATCACTTGCATTCTCTATGAACTACT TCGATCCAGAGCGTACGTTAACAGACGAAGAAGTAACAGAAGCACATAACCGCGTATTAACAGCGGTAGAAGAGAAATTT GGTGCGGAGTTACGTAAGTAA
Upstream 100 bases:
>100_bases AATGTTGAAATACGGCGTAGATGACATTCGTCATTTCTATACAAATGATGTACGTTTCTTACAACAATTCAAACGAGCGT AAGGGAAGGAGAGGATAAGT
Downstream 100 bases:
>100_bases TAAGAAATTGCCGGATTTATTCCGGCAATTTTTTTAGTGGATTGGTTGTCGGAAAATGTCGAAAAATGTCGGAAAATGTC GGTAAGTCGATATATTACAA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLSKCLIDIGEEEPVQIIC GAANIAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMVCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNL HDEVLELGLTPNRADCLNMLGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSPM WMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETLDDQERTLQEHHLVITNGTKAL AVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEG VVEADNLQVQERTVSVTAEKVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGYD HIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEPNEKAPVNLALPMSEERSQLRLSLV PQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELPKEEQHLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGV SNQITYAPAKREGMHPGRTADIVLDGEVIGYIGQLHPEAEKQLDVKNTFVFELSLVKVFGTDAEETYYSAIPRFPSMTRD MAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKF GAELRK
Sequences:
>Translated_806_residues MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLSKCLIDIGEEEPVQIIC GAANIAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMVCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNL HDEVLELGLTPNRADCLNMLGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSPM WMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETLDDQERTLQEHHLVITNGTKAL AVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEG VVEADNLQVQERTVSVTAEKVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGYD HIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEPNEKAPVNLALPMSEERSQLRLSLV PQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELPKEEQHLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGV SNQITYAPAKREGMHPGRTADIVLDGEVIGYIGQLHPEAEKQLDVKNTFVFELSLVKVFGTDAEETYYSAIPRFPSMTRD MAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKF GAELRK >Mature_806_residues MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEADKLSKCLIDIGEEEPVQIIC GAANIAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMVCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNL HDEVLELGLTPNRADCLNMLGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSPM WMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETLDDQERTLQEHHLVITNGTKAL AVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEG VVEADNLQVQERTVSVTAEKVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGYD HIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEPNEKAPVNLALPMSEERSQLRLSLV PQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELPKEEQHLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGV SNQITYAPAKREGMHPGRTADIVLDGEVIGYIGQLHPEAEKQLDVKNTFVFELSLVKVFGTDAEETYYSAIPRFPSMTRD MAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKF GAELRK
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI124028525, Length=278, Percent_Identity=26.6187050359712, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1788006, Length=809, Percent_Identity=38.9369592088999, Blast_Score=525, Evalue=1e-150, Organism=Caenorhabditis elegans, GI17533403, Length=568, Percent_Identity=22.7112676056338, Blast_Score=85, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355211, Length=371, Percent_Identity=25.8760107816712, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88552; Mature: 88552
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA CCCCHHHHHHHHCHHCCHHHHHHHHHHHCCCCEEHHHHHHCCCCEEEEHHHHCCCCCCCH DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMV HHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCHHHHCEECCCCEEEEEEEECCCCCCCCE CALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNML EEHHHCCCCCEEECHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSPM HHHHHHHHHHCCEEECCCCCHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHCCCCCCCCH WMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETLD HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCC DQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDLG CHHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC LRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAEK CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHH VNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGYD HHHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCEECHHHHHHHHHHHCCC HIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEPNEKA CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCC PVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELPKEEQ CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCHHH HLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGVSNQITYAPAKREGMHPGRTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCE DIVLDGEVIGYIGQLHPEAEKQLDVKNTFVFELSLVKVFGTDAEETYYSAIPRFPSMTRD EEEECCHHHHHHHHCCCCHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCC MAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMNYFDPERTL EEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHCCHHHHEEEECCCCCCCCC TDEEVTEAHNRVLTAVEEKFGAELRK CHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA CCCCHHHHHHHHCHHCCHHHHHHHHHHHCCCCEEHHHHHHCCCCEEEEHHHHCCCCCCCH DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMV HHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCHHHHCEECCCCEEEEEEEECCCCCCCCE CALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNML EEHHHCCCCCEEECHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSPM HHHHHHHHHHCCEEECCCCCHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHCCCCCCCCH WMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETLD HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCC DQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDLG CHHHHHHHCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC LRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAEK CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHHHH VNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGYD HHHHHCCCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCEECHHHHHHHHHHHCCC HIPVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEPNEKA CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCC PVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELPKEEQ CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCHHH HLAGVMTGLALHHAWQGEKKVVDFFVVKGVLEGLFDVLGVSNQITYAPAKREGMHPGRTA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCE DIVLDGEVIGYIGQLHPEAEKQLDVKNTFVFELSLVKVFGTDAEETYYSAIPRFPSMTRD EEEECCHHHHHHHHCCCCHHHCCCCCCEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCC MAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMNYFDPERTL EEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHCCHHHHEEEECCCCCCCCC TDEEVTEAHNRVLTAVEEKFGAELRK CHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]