| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118479697
Identifier: 118479697
GI number: 118479697
Start: 4346405
End: 4349266
Strand: Reverse
Name: 118479697
Synonym: BALH_4131
Alternate gene names: NA
Gene position: 4349266-4346405 (Counterclockwise)
Preceding gene: 118479698
Following gene: 118479696
Centisome position: 82.73
GC content: 34.42
Gene sequence:
>2862_bases TTGAACAGGTATCTTAAGATCGTTGTTGCTATGTTTTTAATGATATTTACATTCGTATCAACACTACAACCACTTGCAGT TCAAGCAGCTACTCAATTAGCTGACGGTGAATACTCAATCGGTTTTAAAGTTCTTAAAGACGCATCGGATGAAGTATCCA TGATGAATGAATACTCTGTAAGTCCAGGGACTTTAAAAGTGAAGGATGGGAAAAAGAAAGTGTCCTTTACATTAAAAAAT AGTTCATGGATTACGAAATTTGAAACAGACAAAGCAGGTCAACTTGTTGGGACAAATGTAATTAGTGAAGATAAAGAAAA AGATACAAGAGTAGTAGAATTCGAAGTGGAAGATGTAGAGAAGATATTAAAAGCGAAAGTAAAAGTAGATATTGATTTTC TTAACTATCATCATGAATATGATGTTCGTATTGCATTTGATCAAAATAGCATTACACCAATTCATGTAGAAAAACCAGAT GAAAAAGAGGACCCAGCTAATAAGCCAGATCCAAATGAAACTACGGATCCAGGTCAGAAGCTCGACCAAAAGCCTGACCC AGATCAACAACCAAATTCTAACACAATTGAAGATGGTGCGTACAGCATTCCTTTCAAAGTGTTAAAAGATAAAACAGATG AAGAATCTAAAATGAATAGTTACATGGAAAATCCGGGAGTATTGAAAGTAGAAAATGGTAAGAAAAAAGCGGTTGTAACG TTAAAAAGTAGCTCATTAATTAAAAATTTCCAAACGGAAAAAGATGGTGCATTTGTTGATGCAAAAGTAGTGAGTGAAGA TAAAGAAAAAGATACAAGAGTAGTAGAGTTTGAAGTAGCTGATTTATCGAAAAAACTTAATACAAAAGTATTTATTGAGA TGGCATCAAGAAATTATAAACAAACGCATGACGTACAACTTGTATTTGAACAAGACAAATTGGAACCTATTAAAAGTGAA GACAAACAACCAGACGGAGATAAACAACCAGACGGAGACAAACAACCAGACGGAGACAAACAACCAGACGTAGATAAACA ATCAGACGTAGATACCATTAAAGATGGTGAATACAATATTGGTTTTAAAGTATTGAAAGATAAAACAGAAGAAATTTCAA TGATGAATACGTACACGAAGAGTCCAGGTGTACTAAAAGTGAAAGATGGAAAGAAATATGTATCCTTCACATTAACGAAT AGCTCATGGATTACAAAGTTCGAATTTGAAAAGAATAATTCATTTGTTGATGCAAGTGTATTAAGTGAAGATAAGAAAGC TGATACACGTGTAGTAGAAGTGGAAGTAGCTAATTTATCTAAGAAACTAAATGCAAAAGTGAAAGTAGATATTGATTCAA TGAATTATCACCATTTCTATGATATTCAATTTGCATTTGATAATGATAGTATTCAACCGTTAGACAACCAAGGCGAAAAT GACAACCAAGGTGGAAATAACAACCAAGGCGAAAATGACAACCAAGGTGGAAATAACAATCAAGGTGAAAACGACAACCA AGGTGAAAACGACAACCAAGGTGGAAACGACAACCAAGGTGGAAACGACAACCAAGGTGGAAACGACAAGCAAGGTGAAA ATGACAAGCAAGGTGAAAATGACAAGCAAGGTGGAAACGACAAGCAAGGTGAAAATGACAACCAAGGTGGAAACGACAGC CAAGACGGTAACACAGCAATTGATCCAAACGCTCTTAAAGACGGTGAATACAGTATCGGTTTTAAAGTGTTAAAAGATAA AACAGAAGAAATTTCAATGATGAACACATATACGAAGAATCCGGGTGTATTAAAAGTGAGAGATGGAAAGAAATATGTAT CCTTCACATTAACAAATAGCTCATGGATTACGAAGTTTGAGTTTGAAAAGAATGGTGCGTTCGTCGATGCGCAAGTATTA GGTACAAATAAAGAGAAAGATACAAGAGTAGTAGAAGTGGAAGTAGATGATTTATCGAAAAAGTTAAATGCAAAAGTGAA GGTAGATATCGATGCAATGAATTATCATCATTTCTATGATATTCAATTTGCATTCGATAAAGGAAGTATTAAAGCTTTAG GTAACCAAGGTGGAGATACTAACCAAGATGGTAATGGTAATCAAGTCGGAAGCGACAACCAAGGTGGAAGCGATAACCAA GGTGGAAGTAACAACCAAGATGGAACGAATAATCTAAATGAAAACCTAACAGTTGATCCGAAAAATTTAAAAGATGGTCA GTATGATATTGCTTTTAAAGTGTTAAAAGATAAGACAGAAGAAATTTCAATGATGAATCAATATGTTGTAAGTCCAGCAA GATTAACGGTGAAAGATGGCAAGAAGTATGTCGCAATGACACTGAAAAATAGTGAATGGATTACGAAATTCCAAACAGAA AATAATGGTGGATTTGCAGATGCGAAAGTAGTAAGTGAAGATAAGGCTGCCAATACAAGAGTCGTAGAATTTGAAGCTAA TGATTTATTTGCAAAATTAAATGCAAAAGTAAAAGTAGATATCGATTCAATGAATTACCATCATTTCTACGACGTACAAA TTCAATTTGATACGACGAAGATTGGCGCTGTAGGAACGGTAAAAGAAGAGCCAAAGAATGAGCCAAAGAATGAACCGAAA AAACCAGTAACTACACCAAAAGTAGCTAATGTAAAAACAGTAGGAACTCCTGATTTTAACCGAAATGCAGATGGTAAAAA GAAAAACGAAGTTACAAATAATAATTCGAAAAAAGAGAAAAACTCAAAAACTGCAGATACAGCACAACTTGGTTTATACA TGGTGTTACTGCTAGGTTCACTTGCTTTACTAGTTCGTAAATATAGAGCAGGTAGATTGTAA
Upstream 100 bases:
>100_bases AGCACGTATTGGATTATTTGCGGTGTTAATTCTTATTTCAGGTGTTTTCTTAATTCGTAACGTGAAGTTTAGTAAATAAA TAAAAAGGAGCGTTATTTCA
Downstream 100 bases:
>100_bases TTTTTGGAGTCTTGATGCATGTTCGCGTGCATCAAGACTTGTTTCATATTGTTTGGAAAGGAGTGGTGATTGAGAGTGAA GAAAATTGCAAGTGTACTAA
Product: NEAT family protein
Products: NA
Alternate protein names: InteRNAlin Protein; NEAr Transporter; InteRNAlin; Iron Transport Associated Protein; S-Layer Protein; Iron Transport-Associated Protein; Lpxtg-Motif Cell Wall Anchor Domain Protein; Cell Wall Anchor Domain-Containing Protein; NEAT Family Protein; S-Layer Domain Protein
Number of amino acids: Translated: 953; Mature: 953
Protein sequence:
>953_residues MNRYLKIVVAMFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKN SSWITKFETDKAGQLVGTNVISEDKEKDTRVVEFEVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPD EKEDPANKPDPNETTDPGQKLDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVT LKSSSLIKNFQTEKDGAFVDAKVVSEDKEKDTRVVEFEVADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSE DKQPDGDKQPDGDKQPDGDKQPDVDKQSDVDTIKDGEYNIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTN SSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVANLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQPLDNQGEN DNQGGNNNQGENDNQGGNNNQGENDNQGENDNQGGNDNQGGNDNQGGNDKQGENDKQGENDKQGGNDKQGENDNQGGNDS QDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKNPGVLKVRDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVL GTNKEKDTRVVEVEVDDLSKKLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSDNQ GGSNNQDGTNNLNENLTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTE NNGGFADAKVVSEDKAANTRVVEFEANDLFAKLNAKVKVDIDSMNYHHFYDVQIQFDTTKIGAVGTVKEEPKNEPKNEPK KPVTTPKVANVKTVGTPDFNRNADGKKKNEVTNNNSKKEKNSKTADTAQLGLYMVLLLGSLALLVRKYRAGRL
Sequences:
>Translated_953_residues MNRYLKIVVAMFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKN SSWITKFETDKAGQLVGTNVISEDKEKDTRVVEFEVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPD EKEDPANKPDPNETTDPGQKLDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVT LKSSSLIKNFQTEKDGAFVDAKVVSEDKEKDTRVVEFEVADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSE DKQPDGDKQPDGDKQPDGDKQPDVDKQSDVDTIKDGEYNIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTN SSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVANLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQPLDNQGEN DNQGGNNNQGENDNQGGNNNQGENDNQGENDNQGGNDNQGGNDNQGGNDKQGENDKQGENDKQGGNDKQGENDNQGGNDS QDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKNPGVLKVRDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVL GTNKEKDTRVVEVEVDDLSKKLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSDNQ GGSNNQDGTNNLNENLTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTE NNGGFADAKVVSEDKAANTRVVEFEANDLFAKLNAKVKVDIDSMNYHHFYDVQIQFDTTKIGAVGTVKEEPKNEPKNEPK KPVTTPKVANVKTVGTPDFNRNADGKKKNEVTNNNSKKEKNSKTADTAQLGLYMVLLLGSLALLVRKYRAGRL >Mature_953_residues MNRYLKIVVAMFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSVSPGTLKVKDGKKKVSFTLKN SSWITKFETDKAGQLVGTNVISEDKEKDTRVVEFEVEDVEKILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPD EKEDPANKPDPNETTDPGQKLDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVT LKSSSLIKNFQTEKDGAFVDAKVVSEDKEKDTRVVEFEVADLSKKLNTKVFIEMASRNYKQTHDVQLVFEQDKLEPIKSE DKQPDGDKQPDGDKQPDGDKQPDVDKQSDVDTIKDGEYNIGFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTN SSWITKFEFEKNNSFVDASVLSEDKKADTRVVEVEVANLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQPLDNQGEN DNQGGNNNQGENDNQGGNNNQGENDNQGENDNQGGNDNQGGNDNQGGNDKQGENDKQGENDKQGGNDKQGENDNQGGNDS QDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKNPGVLKVRDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVL GTNKEKDTRVVEVEVDDLSKKLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSDNQ GGSNNQDGTNNLNENLTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSPARLTVKDGKKYVAMTLKNSEWITKFQTE NNGGFADAKVVSEDKAANTRVVEFEANDLFAKLNAKVKVDIDSMNYHHFYDVQIQFDTTKIGAVGTVKEEPKNEPKNEPK KPVTTPKVANVKTVGTPDFNRNADGKKKNEVTNNNSKKEKNSKTADTAQLGLYMVLLLGSLALLVRKYRAGRL
Specific function: Unknown
COG id: COG5386
COG function: function code M; Cell surface protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106246; Mature: 106246
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50978 NEAT ; PS00050 RIBOSOMAL_L23
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYLKIVVAMFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHEECCCCHHHHHHHHCCC SPGTLKVKDGKKKVSFTLKNSSWITKFETDKAGQLVGTNVISEDKEKDTRVVEFEVEDVE CCCEEEEECCCEEEEEEEECCCEEEEECCCCCCCEEECCHHCCCCCCCCEEEEEEHHHHH KILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPDPNETTDPGQK HHHHHHEEEEEEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHH LDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVT CCCCCCCCCCCCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEE LKSSSLIKNFQTEKDGAFVDAKVVSEDKEKDTRVVEFEVADLSKKLNTKVFIEMASRNYK EECCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCEEEEEECCCCCC QTHDVQLVFEQDKLEPIKSEDKQPDGDKQPDGDKQPDGDKQPDVDKQSDVDTIKDGEYNI CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTNSSWITKFEFEKNNSFVDASV CEEEECCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEHHH LSEDKKADTRVVEVEVANLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQPLDNQGEN HCCCCCCCCEEEEEEEEHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCC DNQGGNNNQGENDNQGGNNNQGENDNQGENDNQGGNDNQGGNDNQGGNDKQGENDKQGEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKQGGNDKQGENDNQGGNDSQDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCHHHHHHHHHCCCC PGVLKVRDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVLGTNKEKDTRVVEVEVDDLSK CCEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEHHHHHH KLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSDNQ HCCCEEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GGSNNQDGTNNLNENLTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSPARLTVKDG CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHCCCEEEEEECC KKYVAMTLKNSEWITKFQTENNGGFADAKVVSEDKAANTRVVEFEANDLFAKLNAKVKVD CEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEECCEEEEE IDSMNYHHFYDVQIQFDTTKIGAVGTVKEEPKNEPKNEPKKPVTTPKVANVKTVGTPDFN EECCCCEEEEEEEEEEECEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC RNADGKKKNEVTNNNSKKEKNSKTADTAQLGLYMVLLLGSLALLVRKYRAGRL CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRYLKIVVAMFLMIFTFVSTLQPLAVQAATQLADGEYSIGFKVLKDASDEVSMMNEYSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHEECCCCHHHHHHHHCCC SPGTLKVKDGKKKVSFTLKNSSWITKFETDKAGQLVGTNVISEDKEKDTRVVEFEVEDVE CCCEEEEECCCEEEEEEEECCCEEEEECCCCCCCEEECCHHCCCCCCCCEEEEEEHHHHH KILKAKVKVDIDFLNYHHEYDVRIAFDQNSITPIHVEKPDEKEDPANKPDPNETTDPGQK HHHHHHEEEEEEEEECCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHH LDQKPDPDQQPNSNTIEDGAYSIPFKVLKDKTDEESKMNSYMENPGVLKVENGKKKAVVT CCCCCCCCCCCCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEE LKSSSLIKNFQTEKDGAFVDAKVVSEDKEKDTRVVEFEVADLSKKLNTKVFIEMASRNYK EECCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCEEEEEECCCCCC QTHDVQLVFEQDKLEPIKSEDKQPDGDKQPDGDKQPDGDKQPDVDKQSDVDTIKDGEYNI CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFKVLKDKTEEISMMNTYTKSPGVLKVKDGKKYVSFTLTNSSWITKFEFEKNNSFVDASV CEEEECCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEHHH LSEDKKADTRVVEVEVANLSKKLNAKVKVDIDSMNYHHFYDIQFAFDNDSIQPLDNQGEN HCCCCCCCCEEEEEEEEHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCC DNQGGNNNQGENDNQGGNNNQGENDNQGENDNQGGNDNQGGNDNQGGNDKQGENDKQGEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKQGGNDKQGENDNQGGNDSQDGNTAIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEECCCHHHHHHHHHCCCC PGVLKVRDGKKYVSFTLTNSSWITKFEFEKNGAFVDAQVLGTNKEKDTRVVEVEVDDLSK CCEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEHHHHHH KLNAKVKVDIDAMNYHHFYDIQFAFDKGSIKALGNQGGDTNQDGNGNQVGSDNQGGSDNQ HCCCEEEEEEEEECCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GGSNNQDGTNNLNENLTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQYVVSPARLTVKDG CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHCCCEEEEEECC KKYVAMTLKNSEWITKFQTENNGGFADAKVVSEDKAANTRVVEFEANDLFAKLNAKVKVD CEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEECCEEEEE IDSMNYHHFYDVQIQFDTTKIGAVGTVKEEPKNEPKNEPKKPVTTPKVANVKTVGTPDFN EECCCCEEEEEEEEEEECEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC RNADGKKKNEVTNNNSKKEKNSKTADTAQLGLYMVLLLGSLALLVRKYRAGRL CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA