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The map label for this gene is yedU [C]

Identifier: 118479650

GI number: 118479650

Start: 4300735

End: 4301427

Strand: Direct

Name: yedU [C]

Synonym: BALH_4077

Alternate gene names: 118479650

Gene position: 4300735-4301427 (Clockwise)

Preceding gene: 118479642

Following gene: 118479658

Centisome position: 81.81

GC content: 38.38

Gene sequence:

>693_bases
ATGATGAAGAAAAAAATGTTAGTCGTATTAACGAGCGTAGAAAAATATCCAAATTTAAATCGAGCTACTGGCCTTTGGCT
TGGCGAAGCTGTCCATTTCGTTAAAAAAGTTGAAGAAGCTGGTTACGAAGTAGATTATGTTAGCCCACAAGGTGGTTATA
CACCGATTGATCCGCATAGTTTAGCAATGGCGGAGAGCATCGATTGGGAATGGTATCAAAAGAAAGAATTTATGAATCGT
CTCGGTTCTACAATGAAACCGAGTGAGGTGAATCCGGAAGACTATGTTGTTATTTATTACGCAGGTGGTCACGGTGTGAT
TTGGGACTTCCCAGAAAATAAAGAACTACAAATGATTAGCCGTAACATTTATGAAAATGGCGGAATCGTTTCCTCTGTTT
GTCACGGAGCTGCTGGTTTATTTCATATCACATTAAGCAATGGGGATCGTTTAATTAGTGGTAAAAAAGTAACAGGATTC
TCGAATGAAGAAGAGAAACTAGCTGAATTAGATCAATTTGTTCCATTTTTAACAGAAGATGAACTCATGAAAAATGGAGG
ACTTTACGAAAAAGCTGCAGAGCCTTGGGAAGCTTTCGCTGTAGAAGATAATCGTGTTATCACTGGTCAAAACCCAGCTT
CAGGTGGTACAGTAGCTGAATTAGTATTACAACACGCAAAAAATAACATGTAA

Upstream 100 bases:

>100_bases
GAATCCGATATAAGGAGGGCTGACATGGTTATTCAAATTTGCAATTTCTAACTTAATAAAATAATAAACTTTTATATAGA
AGAAACATTACAGGAGGATT

Downstream 100 bases:

>100_bases
TAAAAAAGCAGGTTTTCCATTACAATAGGAAAACCTGCTTTTTTACGAAATCATTTGCAAAATAGCAATAACTTCTTTTT
CAATTTCCGAATCATCAATT

Product: thiJ/PfpI family protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain-Containing Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; ThiJ Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MMKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNR
LGSTMKPSEVNPEDYVVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGF
SNEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGTVAELVLQHAKNNM

Sequences:

>Translated_230_residues
MMKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNR
LGSTMKPSEVNPEDYVVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGF
SNEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGTVAELVLQHAKNNM
>Mature_230_residues
MMKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHSLAMAESIDWEWYQKKEFMNR
LGSTMKPSEVNPEDYVVIYYAGGHGVIWDFPENKELQMISRNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGF
SNEEEKLAELDQFVPFLTEDELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGTVAELVLQHAKNNM

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=239, Percent_Identity=34.3096234309623, Blast_Score=132, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324967, Length=226, Percent_Identity=32.7433628318584, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6324975, Length=226, Percent_Identity=32.3008849557522, Blast_Score=107, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6323984, Length=226, Percent_Identity=31.858407079646, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25697; Mature: 25697

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHS
CCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
LAMAESIDWEWYQKKEFMNRLGSTMKPSEVNPEDYVVIYYAGGHGVIWDFPENKELQMIS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHH
RNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFSNEEEKLAELDQFVPFLTED
HHHHCCCCHHHHHHHCCCEEEEEEECCCCEEECCCEECCCCCHHHHHHHHHHHCCCCCHH
ELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGTVAELVLQHAKNNM
HHHHCCCCCHHHCCCHHEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKKKMLVVLTSVEKYPNLNRATGLWLGEAVHFVKKVEEAGYEVDYVSPQGGYTPIDPHS
CCCCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
LAMAESIDWEWYQKKEFMNRLGSTMKPSEVNPEDYVVIYYAGGHGVIWDFPENKELQMIS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHHH
RNIYENGGIVSSVCHGAAGLFHITLSNGDRLISGKKVTGFSNEEEKLAELDQFVPFLTED
HHHHCCCCHHHHHHHCCCEEEEEEECCCCEEECCCEECCCCCHHHHHHHHHHHCCCCCHH
ELMKNGGLYEKAAEPWEAFAVEDNRVITGQNPASGGTVAELVLQHAKNNM
HHHHCCCCCHHHCCCHHEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA