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The map label for this gene is rng [H]

Identifier: 118479601

GI number: 118479601

Start: 4240737

End: 4242125

Strand: Reverse

Name: rng [H]

Synonym: BALH_4028

Alternate gene names: 118479601

Gene position: 4242125-4240737 (Counterclockwise)

Preceding gene: 118479602

Following gene: 118479600

Centisome position: 80.69

GC content: 34.63

Gene sequence:

>1389_bases
TTGAAAACGTTATATATGAACTACGCTGGATCGGAAAAACGCGTTGCAATTGAAGAGAATAAGAAAATTGTTGAGTTTTT
ATGGAAACGAAATGAAGAACAAGAGATTGTTGGGCATATTTATGTTGGACGTATCGTAAGAACGATTGCTGGAATGAACG
CAGCTTTTGTAAATATCGGTTTAGAAAAACATGCGTATCTTTCGTACGATGATGTACCATCTTCTTATCGAATACATGAA
GGACAAGCGGTACTCGTACAAGTTGTAAAAGAGGCAATTGATACGAAAGGGCCGAAATTGACAGCAAATATAGAATTTAC
CGGGAAATATGTCGTTTATATGCCATATGATGAAATGCGTGCGGTTTCTCGGAAAATAAAAAACAATAAAAGAAGGCAAC
AACTACTCCAAATTGAAGTAGAAGGGACAGGAGGTTATATTTTTCGCTCTGCTTCTGAAAAAGGAAAGATTGAAGAAATA
CAAGCTGAAATGCAAAGGTTACAGCAGTTATATGAAGAGTTAAAAAGAAAAGAGGAACAAGGAAAGGCACCGTTACTACT
TCATCGACCGGCAACTTTTTTAGATCGTGTATTTCAAGAAAATCCAATTGAAACGATTGAAAAAATAGTTGTAGATACAA
GGAGTATAGTAAAAGAATTAGAAGAAAAGGTCGGTAAAGAGAAAGTATCTTTTTATAACGAAAAATCTTCAATGTTTAAC
CATTTTGGAATAGAGCGTGAAATTGAGAAAGCACTTCAAAAAATTGTGTGGCTTCCAAATGGTGCTTATTTAATTGTGGA
ACAAATGGAGACGATGACTGTAATTGATGTGAATACAGGTAAGTTTACTGGAAAACAGAATTTACAAGATACAGTTCTTC
GTACAAATGAATTGGCAGCTGAAGAGATAGCGCGTCAATTAAGACTGCGTGATATCGGTGGTATGATATTAATTGATTTT
ATTAATATGAAAAGAAGAGAAGATAAAGAAAAGGTAAGAGAATGTCTCGTGGCTGCTATGCAAAATGATCGTACATATAC
AAGGGTACTCGGGTTTACAGAGTTAGGGATTTTAGAGATGACACGTAAACGTAAGAAACATTCTTTACGCGACGTATTAC
TAGAAGAGTGTGCACCGTGCAAAGCGACGGGGTATGTAATGTCATATGAAACAATTGCGTATGAGCTAGAGAGAGAGCTA
ATTACATATGGCAATATAGAAGATGAGGCAGTATTAATCTCTGCACCTAAAGAACTGCAAAAACAATTTTCGCAAAAAGA
ATTACAAAAAAATATTCCATTTGAAATTTATTTCAAAGATGATATGATCGAAAAGTATGCAATTATCCGTTTTGGAAGTA
AAAAAGAAATTGTAGAACGGAAAAAATAG

Upstream 100 bases:

>100_bases
ACAACTTCATCTGTTGAAGAATTAATCGGTTAGTGTTGACGTTAGCACTAACCTTTTATTATTGTAAAAGCAAAGAAGAT
TATAAAGTGAGGAAAGAATT

Downstream 100 bases:

>100_bases
TTAGTAGAACTTTCATTGACAACCGTCTATGATTCATGATAACATCTTTATGTTATAGTTTATAGCACCTAAACGGCTAT
ATGCTACAACCGCACAAGAC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEEQGKAPLLLHRPATFLDRVFQENPIETIEKIVVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNELAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKK

Sequences:

>Translated_462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEEQGKAPLLLHRPATFLDRVFQENPIETIEKIVVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNELAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKK
>Mature_462_residues
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIGLEKHAYLSYDDVPSSYRIHE
GQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMRAVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEI
QAEMQRLQQLYEELKRKEEQGKAPLLLHRPATFLDRVFQENPIETIEKIVVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNELAAEEIARQLRLRDIGGMILIDF
INMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEMTRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELEREL
ITYGNIEDEAVLISAPKELQKQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKK

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=425, Percent_Identity=35.5294117647059, Blast_Score=244, Evalue=1e-65,
Organism=Escherichia coli, GI1787325, Length=425, Percent_Identity=30.1176470588235, Blast_Score=208, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 53826; Mature: 53826

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEIQAEMQRLQQLYEELKRKEEQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GKAPLLLHRPATFLDRVFQENPIETIEKIVVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNELAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLISAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKK
HHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCHHHHHHCCC
>Mature Secondary Structure
MKTLYMNYAGSEKRVAIEENKKIVEFLWKRNEEQEIVGHIYVGRIVRTIAGMNAAFVNIG
CCEEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC
LEKHAYLSYDDVPSSYRIHEGQAVLVQVVKEAIDTKGPKLTANIEFTGKYVVYMPYDEMR
CCCCEEECCCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECHHHHH
AVSRKIKNNKRRQQLLQIEVEGTGGYIFRSASEKGKIEEIQAEMQRLQQLYEELKRKEEQ
HHHHHHHCCHHHHEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GKAPLLLHRPATFLDRVFQENPIETIEKIVVDTRSIVKELEEKVGKEKVSFYNEKSSMFN
CCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
HFGIEREIEKALQKIVWLPNGAYLIVEQMETMTVIDVNTGKFTGKQNLQDTVLRTNELAA
HCCCHHHHHHHHHHHEECCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
EEIARQLRLRDIGGMILIDFINMKRREDKEKVRECLVAAMQNDRTYTRVLGFTELGILEM
HHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHH
TRKRKKHSLRDVLLEECAPCKATGYVMSYETIAYELERELITYGNIEDEAVLISAPKELQ
HHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
KQFSQKELQKNIPFEIYFKDDMIEKYAIIRFGSKKEIVERKK
HHHHHHHHHHCCCEEEEECCHHHHHHHHEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]