Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is relA [H]
Identifier: 118479564
GI number: 118479564
Start: 4200342
End: 4202525
Strand: Reverse
Name: relA [H]
Synonym: BALH_3988
Alternate gene names: 118479564
Gene position: 4202525-4200342 (Counterclockwise)
Preceding gene: 118479565
Following gene: 118479563
Centisome position: 79.94
GC content: 36.81
Gene sequence:
>2184_bases ATGGCAAATGAGCAGGTACTAACAGCTGAACAGGTACTCGAGAAAGCAAGTCAATATTTAGTGGATGAAGATATTGAGCT AGTAGCACGCGCCTATGAATATGCACGCGATGCGCATAGCGAACAATATAGAAAATCGGGTGAACCGTACATTATTCATC CAATTCAAGTTGCAGGTATTTTAGTTGATTTACACATGGATCCAGCTACAGTATCAGCAGGTTTCTTACATGATGTAGTA GAAGATACAGAGATTACATTAGAAGATATTGAACGGGAATTTAATAAAGAAATTGCTATGCTTGTCGATGGTGTAACAAA GCTCGGAAAGATTAAATATAAATCTCATGAGCAACAACAAGCAGAAAACCATCGCAAAATGTTTATTGCAATGGCTCAAG ATATTCGAGTTATTTTAATTAAACTAGCTGATCGTCTTCATAACATGCGTACATTGAAACATTTGCCTCAAGAGAAGCAG CGTCGCATTGCGAATGAAACGTTAGAAATCTTTGCACCTTTAGCACATAGACTCGGAATTAGTACTATTAAATGGGAGCT AGAGGATACGTCACTTCGCTATTTAAATCCACAGCAATATTATCGTATTGTAAATTTAATGAAGCGTAAACGTGCAGAAC GTGAAGAGTATTTAGACGAAGTAATGACTGGTATTCGTGAGAAATTAGACGAAGTTGCAATTCAACCTGAAATTTCAGGA AGACCAAAACATATTTACAGTATTTATCGTAAAATGGCACTGCAAAATAAACAGTTCAATGAAATTTACGATCTATTAGC TGTACGTGTCGTTGTAAATAGTATTAAAGATTGTTATGCGGTACTTGGAATTATTCATACGTGTTGGAAGCCTATGCCAG GGCGTTTTAAAGATTATATAGCAATGCCAAAAGCAAACCTATATCAATCTCTTCATACGACTGTAATTGGGCCAAAAGGT GATCCGCTTGAAGTGCAAATTCGTACGAAAGAAATGCATGAGATTGCAGAATTCGGGATCGCGGCACACTGGGCGTATAA AGAAGGAAAAACAGCAGAAACAACGGGTACATTAGAGAAGAAACTTACATGGTTCCGTCAAATATTAGAATGGCAAAATG AAGCTTCTAATGCAGAAGAGTTTATGGAATCATTAAAAATTGATTTATTCTCTGACATGGTATTCGTCTTTACACCGAAA GGCGATGTAATGGAATTGCCACTTGGATCTGTTCCGATTGACTTTGCATATCGTGTGCATTCAGAAATTGGAAATAAAAC AATTGGTGCAAAAGTAAATGGGAAAATGGTGACACTTGACTATAAATTAAAAACAGGTGATATCATTGAAATTTTAACAT CAAAACATTCGTATGGACCAAGTCAAGATTGGGTGAAACTTGCTCAAACATCTCATGCAAAAAACAAAATACGTCAATTC TTTAAGAAGCAACGTAGAGATGAAAATATTGAAAAAGGCCGTGAACTTGTTGAGAAAGAAGTGCGTAGCCTAGAGTATGA GATGAAAGAAGTGTTAGCTCCTGACAATTTAAAACGTGTTGCTGAAAAATTCAACTTTGCAAATGAAGAAGATATGTTTG CAGCAGTTGGATATAATGGCATCACTGCATCACAAATTGTTACGCGACTAACGGACAAGTTCCGTAAGCAACGTGAAGAA GAAGAGATTGTTGAAGTTAAAGAAGTTCGTAAACCGATGAAAATTCGAAAATGGGATTCTGGCGTTAAAGTGAGCGGTGC GGATAATTTATTAATTCGTTTATCAAAATGCTGTAACCCAGTACCTGGTGATGATATCGTTGGATATATTACGAAAGGCC GAGGCGTATCAATTCACCGCCGTGATTGTGTAAATGTTCATACAGAAGAAGCGATAGAGCGTTTATTAGAAGTAGAGTGG GAAGGTAGTCCTGAAAAAGAAATTGAGTATAACGTTGATATTGAAATTTCAGGTTACGATCGCCGTGGTTTATTAAACGA AGTATTACAAGCTGTTACAGAGACGAAAACGTACATTTCAGCAGTTTCTGGTAGAAGTGACCGTAATAAGATGGCGACAA TTAATATGTCAATCTCTATTCGTAACTTACAGCACTTGAAAAAAGTAGTAGAACGCATTAAACGTGTTCCAGAAATTTAT GCAGTACGACGCATGATGCATTAA
Upstream 100 bases:
>100_bases CTTTTCCTTTTCACAATTCACAATCATTGGGTTATAATGATAGAATATAATTTATTCTATTTAATAAAGATAAAGTCAAT TTTCAATAAAAGGTGATTCG
Downstream 100 bases:
>100_bases TAGGGAGTGTAGAAAAGATGAGAGTTGTTTTACAACGATCAAAAGAAGCGTCTGTCACAGTAGACGGTGAGATCGTAGGA CAAATTCCGTTCGGTTTAAC
Product: GTP diphosphokinase
Products: NA
Alternate protein names: (p)ppGpp synthase; ATP:GTP 3'-pyrophosphotransferase; ppGpp synthase I [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MANEQVLTAEQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVV EDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQ RRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISG RPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKG DPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPK GDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQF FKKQRRDENIEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNGITASQIVTRLTDKFRKQREE EEIVEVKEVRKPMKIRKWDSGVKVSGADNLLIRLSKCCNPVPGDDIVGYITKGRGVSIHRRDCVNVHTEEAIERLLEVEW EGSPEKEIEYNVDIEISGYDRRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIY AVRRMMH
Sequences:
>Translated_727_residues MANEQVLTAEQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVV EDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQ RRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISG RPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKG DPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPK GDVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQF FKKQRRDENIEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNGITASQIVTRLTDKFRKQREE EEIVEVKEVRKPMKIRKWDSGVKVSGADNLLIRLSKCCNPVPGDDIVGYITKGRGVSIHRRDCVNVHTEEAIERLLEVEW EGSPEKEIEYNVDIEISGYDRRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIY AVRRMMH >Mature_726_residues ANEQVLTAEQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVE DTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQR RIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISGR PKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGD PLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPKG DVMELPLGSVPIDFAYRVHSEIGNKTIGAKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQFF KKQRRDENIEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNGITASQIVTRLTDKFRKQREEE EIVEVKEVRKPMKIRKWDSGVKVSGADNLLIRLSKCCNPVPGDDIVGYITKGRGVSIHRRDCVNVHTEEAIERLLEVEWE GSPEKEIEYNVDIEISGYDRRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIYA VRRMMH
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the formation of pppGpp which i
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38348360, Length=131, Percent_Identity=37.4045801526718, Blast_Score=67, Evalue=8e-11, Organism=Escherichia coli, GI1790082, Length=707, Percent_Identity=40.5940594059406, Blast_Score=565, Evalue=1e-162, Organism=Escherichia coli, GI1789147, Length=691, Percent_Identity=39.3632416787265, Blast_Score=532, Evalue=1e-152, Organism=Caenorhabditis elegans, GI25143118, Length=132, Percent_Identity=37.8787878787879, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24650996, Length=127, Percent_Identity=36.2204724409449, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR003607 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 84080; Mature: 83949
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEQVLTAEQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGI CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEEEE LVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQ EEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC STIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISG CCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEK CCCHHHHHHHHHHHEECCCCCCEEEEEEHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHH KLTWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCHHHHHHHH SEIGNKTIGAKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQF HHHCCCEECCEECCEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FKKQRRDENIEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCC ITASQIVTRLTDKFRKQREEEEIVEVKEVRKPMKIRKWDSGVKVSGADNLLIRLSKCCNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCHHHHHHHHHCCC VPGDDIVGYITKGRGVSIHRRDCVNVHTEEAIERLLEVEWEGSPEKEIEYNVDIEISGYD CCCCCCEEEEECCCCCEEECHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC RRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCHHHH AVRRMMH HHHHHCC >Mature Secondary Structure ANEQVLTAEQVLEKASQYLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGI CCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHEEEEE LVDLHMDPATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQ EEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC STIKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQPEISG CCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEK CCCHHHHHHHHHHHEECCCCCCEEEEEEHHHHHHHHHHCHHHEEECCCCCCCCHHHHHHH KLTWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPKGDVMELPLGSVPIDFAYRVH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCHHHHHHHH SEIGNKTIGAKVNGKMVTLDYKLKTGDIIEILTSKHSYGPSQDWVKLAQTSHAKNKIRQF HHHCCCEECCEECCEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FKKQRRDENIEKGRELVEKEVRSLEYEMKEVLAPDNLKRVAEKFNFANEEDMFAAVGYNG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCC ITASQIVTRLTDKFRKQREEEEIVEVKEVRKPMKIRKWDSGVKVSGADNLLIRLSKCCNP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECCCCHHHHHHHHHCCC VPGDDIVGYITKGRGVSIHRRDCVNVHTEEAIERLLEVEWEGSPEKEIEYNVDIEISGYD CCCCCCEEEEECCCCCEEECHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCC RRGLLNEVLQAVTETKTYISAVSGRSDRNKMATINMSISIRNLQHLKKVVERIKRVPEIY CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHCHHHH AVRRMMH HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9383190; 9384377 [H]