Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is dtD [H]
Identifier: 118479563
GI number: 118479563
Start: 4199884
End: 4200324
Strand: Reverse
Name: dtD [H]
Synonym: BALH_3987
Alternate gene names: 118479563
Gene position: 4200324-4199884 (Counterclockwise)
Preceding gene: 118479564
Following gene: 118479562
Centisome position: 79.9
GC content: 38.78
Gene sequence:
>441_bases ATGAGAGTTGTTTTACAACGATCAAAAGAAGCGTCTGTCACAGTAGACGGTGAGATCGTAGGACAAATTCCGTTCGGTTT AACATTACTAGTTGGCATTACGCATGAAGATACAGAAAAAGATGCAACTTACATTGCAGAAAAAATTGCGAACTTACGTA TTTTTGAAGATGAGAGCGGAAAGATGAACCATTCTGTACTCGATGTAGAAGGACAAGTTCTATCCATCTCGCAATTCACA TTATACGGAGATTGCCGTAAGGGAAGACGTCCAAACTTTATGGATGCTGCCAAACCTGACTATGCAGAGCATTTATATGA TTTCTTTAATGAAGAAGTTCGTAAGCAAGGATTGCATGTAGAAACAGGGGAGTTCGGAGCAATGATGGATGTTTCTTTAA TCAATGATGGTCCGGTTACCTTAATTGTGGAAAGTAAATAA
Upstream 100 bases:
>100_bases GTAACTTACAGCACTTGAAAAAAGTAGTAGAACGCATTAAACGTGTTCCAGAAATTTATGCAGTACGACGCATGATGCAT TAATAGGGAGTGTAGAAAAG
Downstream 100 bases:
>100_bases TGTTGCAAGAAGAGAGGATGATATCATCCTCTCTTTTTTATACATTGTTGTATGTTTTGTTCATTTATCCCGCTATTTGG ATTCTTATTTTTAGGATTAA
Product: D-tyrosyl-tRNA(Tyr) deacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRVVLQRSKEASVTVDGEIVGQIPFGLTLLVGITHEDTEKDATYIAEKIANLRIFEDESGKMNHSVLDVEGQVLSISQFT LYGDCRKGRRPNFMDAAKPDYAEHLYDFFNEEVRKQGLHVETGEFGAMMDVSLINDGPVTLIVESK
Sequences:
>Translated_146_residues MRVVLQRSKEASVTVDGEIVGQIPFGLTLLVGITHEDTEKDATYIAEKIANLRIFEDESGKMNHSVLDVEGQVLSISQFT LYGDCRKGRRPNFMDAAKPDYAEHLYDFFNEEVRKQGLHVETGEFGAMMDVSLINDGPVTLIVESK >Mature_146_residues MRVVLQRSKEASVTVDGEIVGQIPFGLTLLVGITHEDTEKDATYIAEKIANLRIFEDESGKMNHSVLDVEGQVLSISQFT LYGDCRKGRRPNFMDAAKPDYAEHLYDFFNEEVRKQGLHVETGEFGAMMDVSLINDGPVTLIVESK
Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]
COG id: COG1490
COG function: function code J; D-Tyr-tRNAtyr deacylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTD family [H]
Homologues:
Organism=Homo sapiens, GI30795227, Length=149, Percent_Identity=45.6375838926174, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1790320, Length=144, Percent_Identity=47.2222222222222, Blast_Score=142, Evalue=7e-36, Organism=Caenorhabditis elegans, GI115533292, Length=149, Percent_Identity=46.3087248322148, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6319982, Length=148, Percent_Identity=41.8918918918919, Blast_Score=117, Evalue=5e-28, Organism=Drosophila melanogaster, GI281361569, Length=147, Percent_Identity=44.2176870748299, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003732 [H]
Pfam domain/function: PF02580 Tyr_Deacylase [H]
EC number: NA
Molecular weight: Translated: 16324; Mature: 16324
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVLQRSKEASVTVDGEIVGQIPFGLTLLVGITHEDTEKDATYIAEKIANLRIFEDESG CCEEEECCCCCEEEECCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCEEEEECCCC KMNHSVLDVEGQVLSISQFTLYGDCRKGRRPNFMDAAKPDYAEHLYDFFNEEVRKQGLHV CCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE ETGEFGAMMDVSLINDGPVTLIVESK ECCCCCCEEEEEEECCCCEEEEEECC >Mature Secondary Structure MRVVLQRSKEASVTVDGEIVGQIPFGLTLLVGITHEDTEKDATYIAEKIANLRIFEDESG CCEEEECCCCCEEEECCEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCEEEEECCCC KMNHSVLDVEGQVLSISQFTLYGDCRKGRRPNFMDAAKPDYAEHLYDFFNEEVRKQGLHV CCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE ETGEFGAMMDVSLINDGPVTLIVESK ECCCCCCEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA