Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is yrrS [H]
Identifier: 118479539
GI number: 118479539
Start: 4171437
End: 4172087
Strand: Reverse
Name: yrrS [H]
Synonym: BALH_3962
Alternate gene names: 118479539
Gene position: 4172087-4171437 (Counterclockwise)
Preceding gene: 118479540
Following gene: 118479537
Centisome position: 79.36
GC content: 38.56
Gene sequence:
>651_bases ATGGCAGGAGGATCTAGATTCCAACAGAAACAACAAAAACGTCGTCAAAACGGTGTTTTAAATATTGCAATCGCTATTGT ACTAGTAGCAGTAGCTATTGTAGCATATCAATTGTTTGTTCCTGATACGAAAGAGCAAGCGTCTTCTAGCGATAAAAAGG TGTCTCAGCAAACAACGAAAGAGAATAAGTCTGAGAAAGCTAAAGGCAAAGAAGAGACGAAGAAGAATGAACAAGAGAAA ACAGAGGCTAAGAAGAAAGAAGAAGAAGAAAAGCTAAAGGCTGAAGAAGAACAGAAAAAAGCTGAAGAAGAAGCGAAAGC TAACGAGAAAGTACCAGCTGAAAAAACACAGCCAAAGGCAACTGACGCTTATACGAAATCTTCTTGGAAGCCAGTAGGAA CAGAGCAAGGTGCAACACCTGCGATGACGTTTAAAAAAGGTACAGCAGATTGGAATGAGATGAATCAAGCGATTTCAGCT GCAATTGACGTTCCGGTAGAGCAATTAATTATTCATCGAATCGGAAATAACGGTAAGAATAAAGCTTACGGTAACGTACA AGATAAACAATCAGGTCAAAGATATTATGTAAATATTGATTGGGTAGAGAATGAGGGCTGGAAACCAGTACTTGTTCAAA CTCTAAACTAA
Upstream 100 bases:
>100_bases GAAATGTTTTCATTTCGTGAAAATATTATTGTAGATGTTCAACCTTTCTAGATTTAATGTTACAATAGCAAGTATGAAAA ACTGCATGGAGGTTTGAAGA
Downstream 100 bases:
>100_bases AAAAGAGAAGCTCCTAAGGAGCTTCTCTTTTTTAGTTAGCGTAATTTCTTTAATTTAAAATGAACAACTGCGCTATAATA TGGTCTTTTGCTTTCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAGGSRFQQKQQKRRQNGVLNIAIAIVLVAVAIVAYQLFVPDTKEQASSSDKKVSQQTTKENKSEKAKGKEETKKNEQEK TEAKKKEEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPKATDAYTKSSWKPVGTEQGATPAMTFKKGTADWNEMNQAISA AIDVPVEQLIIHRIGNNGKNKAYGNVQDKQSGQRYYVNIDWVENEGWKPVLVQTLN
Sequences:
>Translated_216_residues MAGGSRFQQKQQKRRQNGVLNIAIAIVLVAVAIVAYQLFVPDTKEQASSSDKKVSQQTTKENKSEKAKGKEETKKNEQEK TEAKKKEEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPKATDAYTKSSWKPVGTEQGATPAMTFKKGTADWNEMNQAISA AIDVPVEQLIIHRIGNNGKNKAYGNVQDKQSGQRYYVNIDWVENEGWKPVLVQTLN >Mature_215_residues AGGSRFQQKQQKRRQNGVLNIAIAIVLVAVAIVAYQLFVPDTKEQASSSDKKVSQQTTKENKSEKAKGKEETKKNEQEKT EAKKKEEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPKATDAYTKSSWKPVGTEQGATPAMTFKKGTADWNEMNQAISAA IDVPVEQLIIHRIGNNGKNKAYGNVQDKQSGQRYYVNIDWVENEGWKPVLVQTLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009988 [H]
Pfam domain/function: PF07423 DUF1510 [H]
EC number: NA
Molecular weight: Translated: 24193; Mature: 24062
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGSRFQQKQQKRRQNGVLNIAIAIVLVAVAIVAYQLFVPDTKEQASSSDKKVSQQTTK CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH ENKSEKAKGKEETKKNEQEKTEAKKKEEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPKA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TDAYTKSSWKPVGTEQGATPAMTFKKGTADWNEMNQAISAAIDVPVEQLIIHRIGNNGKN HHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC KAYGNVQDKQSGQRYYVNIDWVENEGWKPVLVQTLN CCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure AGGSRFQQKQQKRRQNGVLNIAIAIVLVAVAIVAYQLFVPDTKEQASSSDKKVSQQTTK CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHH ENKSEKAKGKEETKKNEQEKTEAKKKEEEEKLKAEEEQKKAEEEAKANEKVPAEKTQPKA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TDAYTKSSWKPVGTEQGATPAMTFKKGTADWNEMNQAISAAIDVPVEQLIIHRIGNNGKN HHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC KAYGNVQDKQSGQRYYVNIDWVENEGWKPVLVQTLN CCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]