| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yojF [H]
Identifier: 118478732
GI number: 118478732
Start: 3303429
End: 3303779
Strand: Reverse
Name: yojF [H]
Synonym: BALH_3122
Alternate gene names: 118478732
Gene position: 3303779-3303429 (Counterclockwise)
Preceding gene: 118478734
Following gene: 118478731
Centisome position: 62.84
GC content: 37.61
Gene sequence:
>351_bases ATGGAAATAGTAAAAGATAGTTCTCTTATTCAAAATGAAATTGAACGTTTTGTAAATAAAGATGTATATATTCATTTAGA AACAACGAACGGAGCATATGCGTCACACTTTAACGAAAAGATGATGACAGTTGGTGCATTCATTCGAAATGCAATTATTC GCTTTGAACGCGGGAAGATTACTGGAACGAATCCATACCGAGTTGGTCTGAAAATGGATCATGGGTGGGTATATGCAGAA GGTATTACGCACTGGGAAGTAGACGATAAAGAGCGTTTATTACTTGCAGGGCACGATAATCAAGGTCGCTTAGCAGTTGC ACTTGAGTTAAGCTTAACGCCATTTAAGTAA
Upstream 100 bases:
>100_bases ACACAGTGCAAATTATTAGGAAAAGTGGGCGCTGTCCTCTAATATAGAGATAGCAATTTACATTATTTTTGCGTAAAATG GTTTAAAGAGGTGAATTCCG
Downstream 100 bases:
>100_bases GAAGGAGGGAAACTTATGGAGAGACATGTACTTGTTGTATTTCCGCATCCAGATGACGAAGCATTTGCTGCGGGAGGAAC AATTCGCTTATTAACAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MEIVKDSSLIQNEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKITGTNPYRVGLKMDHGWVYAE GITHWEVDDKERLLLAGHDNQGRLAVALELSLTPFK
Sequences:
>Translated_116_residues MEIVKDSSLIQNEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKITGTNPYRVGLKMDHGWVYAE GITHWEVDDKERLLLAGHDNQGRLAVALELSLTPFK >Mature_116_residues MEIVKDSSLIQNEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKITGTNPYRVGLKMDHGWVYAE GITHWEVDDKERLLLAGHDNQGRLAVALELSLTPFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014934 [H]
Pfam domain/function: PF08830 DUF1806 [H]
EC number: NA
Molecular weight: Translated: 13292; Mature: 13292
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVKDSSLIQNEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKI CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCEE TGTNPYRVGLKMDHGWVYAEGITHWEVDDKERLLLAGHDNQGRLAVALELSLTPFK ECCCCEEEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCC >Mature Secondary Structure MEIVKDSSLIQNEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKI CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCEE TGTNPYRVGLKMDHGWVYAEGITHWEVDDKERLLLAGHDNQGRLAVALELSLTPFK ECCCCEEEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]