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The map label for this gene is nsr [H]

Identifier: 118478717

GI number: 118478717

Start: 3289568

End: 3290299

Strand: Reverse

Name: nsr [H]

Synonym: BALH_3103

Alternate gene names: 118478717

Gene position: 3290299-3289568 (Counterclockwise)

Preceding gene: 118478720

Following gene: 118478716

Centisome position: 62.59

GC content: 31.69

Gene sequence:

>732_bases
TTGATTACAATGGGGATGAGTTGTAAAGGCGGGGGAACTATGAAGAAAGTATGTAATTCTATTAAATTAGCAGAGTATAT
GAAACAAAATAATATTGACTCTTTTTTTAGTAATGATATGAATCCGTATATGGAACTTATATTTTTTAAAAAGAATGAGT
TTATTTGCAGAGAAAATGAAGAGATAGATTATTTATATTTTTTCGTTGAAGGAAAAGCGAAGGCATTTAATACATTAAGT
AACGGTAAATCTGTATTATTATGCTTTTATGATAGTTTGCAGCTGTTAGGAGATGTGGAGTTAATTCATTCTCAAAAGAC
TGCTTCAAACGTACAAGTAATGGCAGATTCATATTGTGTTGGTTTACCTTTAGGAAAAGTGAGAAATCAACTATTTCATG
ATGCGAAATTTTTACGATGTATTTGCGGATCGTTAGCACATAAATTAAACCGACTTTCAAAAAATAGTACAATTAATTTA
CTATATCCACTTGAAAATAGACTTGCGAGTTACATGTTAGCAGCAGGGGAACGAGCGGTGCAGCATGGAAATCGAATTGT
ATTTAGTGGGAATTTAACAGAAACAGCTGAATTGTTAGGAACGAGTTATCGGCACTTATTACGTACATTAAATATTTTTT
GTGATAAAGAGATTATAAAGAAGAACAATGGTTGCTTTGAAGTAGTGAATGTGGATGTTTTGAGGGAATTGGCGGCAGAT
GTTTATAAATAG

Upstream 100 bases:

>100_bases
ATACAATGTAAGATCCCCTTTAATTTTCATATTTGTAATGACTGTATCATGCTGAAATTGTGCATTACTATGACATATGT
CATAGTGGAAGAAGAAAATT

Downstream 100 bases:

>100_bases
GAGGAGAGTTTAAATGATTACACCTATATTTAGAATTTTTGATATTGAAAAAGCAAAGCGATTTTACATAGATTTTTTAG
AATTTAATATGGATTGGGAA

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MITMGMSCKGGGTMKKVCNSIKLAEYMKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLS
NGKSVLLCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINL
LYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHLLRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAAD
VYK

Sequences:

>Translated_243_residues
MITMGMSCKGGGTMKKVCNSIKLAEYMKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLS
NGKSVLLCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINL
LYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHLLRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAAD
VYK
>Mature_243_residues
MITMGMSCKGGGTMKKVCNSIKLAEYMKQNNIDSFFSNDMNPYMELIFFKKNEFICRENEEIDYLYFFVEGKAKAFNTLS
NGKSVLLCFYDSLQLLGDVELIHSQKTASNVQVMADSYCVGLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINL
LYPLENRLASYMLAAGERAVQHGNRIVFSGNLTETAELLGTSYRHLLRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAAD
VYK

Specific function: Transcription regulator involved in mid-term, stationary-phase viability under nitrogen starvation. Might control expression of the salvage pathways or in some other way repress the recycling of nucleobases to nucleic acids and enhance their use as genera

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788487, Length=215, Percent_Identity=30.2325581395349, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR012318
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding [H]

EC number: NA

Molecular weight: Translated: 27553; Mature: 27553

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMGMSCKGGGTMKKVCNSIKLAEYMKQNNIDSFFSNDMNPYMELIFFKKNEFICRENE
CEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHEEEEECCCEEECCCC
EIDYLYFFVEGKAKAFNTLSNGKSVLLCFYDSLQLLGDVELIHSQKTASNVQVMADSYCV
CCEEEEEEEECCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEE
GLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYMLAAGERAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
QHGNRIVFSGNLTETAELLGTSYRHLLRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAAD
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEHHHHHHHHHHHH
VYK
HCC
>Mature Secondary Structure
MITMGMSCKGGGTMKKVCNSIKLAEYMKQNNIDSFFSNDMNPYMELIFFKKNEFICRENE
CEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHEEEEECCCEEECCCC
EIDYLYFFVEGKAKAFNTLSNGKSVLLCFYDSLQLLGDVELIHSQKTASNVQVMADSYCV
CCEEEEEEEECCHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEE
GLPLGKVRNQLFHDAKFLRCICGSLAHKLNRLSKNSTINLLYPLENRLASYMLAAGERAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHH
QHGNRIVFSGNLTETAELLGTSYRHLLRTLNIFCDKEIIKKNNGCFEVVNVDVLRELAAD
HCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEHHHHHHHHHHHH
VYK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]