| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yfnA [H]
Identifier: 118478442
GI number: 118478442
Start: 2975652
End: 2977067
Strand: Reverse
Name: yfnA [H]
Synonym: BALH_2812
Alternate gene names: 118478442
Gene position: 2977067-2975652 (Counterclockwise)
Preceding gene: 118478443
Following gene: 118478441
Centisome position: 56.63
GC content: 36.16
Gene sequence:
>1416_bases ATGAGTAAGTTATTAAAAAAGAAATCCGTTACACAATTGTTGGAGCATAATCAAAGTAAGGCCTTAACGAAAACATTAGG AGCATTTGATTTAATTATGTTAGGGGTAGGCTCGATAATTGGAACGGGGGTTCTTGTGTTAACTGGATTAGTAGCAGCAA GAGATGCTGGTCCAGCAGTTATTTTTTCATTTGTACTTGCAGCAATTATATGCGGATTTATAGCATTATGTTACGCAGAA ATTGCTTCCACACTCCCGGCGTCTGGTAGTGTATATACGTACTCATATGCAACAATTGGTGAGTTTGTTGCTCATCTAGT AGGTTGGTCTTTACTGTTAATATATATTGTGGCAACAGCGGCTGTCGCTGCTGGATGGACAGGCTATTTCCACAATTTAA TAAAAGGGTTTGGATTAGAGCTACCTAAAGCTCTAGTAACGATCCCTTCACATGGTGGTATTGTAAATCTACCAGCAGTA ATCATTACATTGGTATTAGCATGGATGTTATCCCGTGGTACGAGGGAAAGTAAACGAATCAATAATATAATGGTATTGAT TAAAATTGGTATGATTTTATTGTTTATTACAGTTGGTATATTCTATGTAAAACCAATGAACTGGATACCAATTGCACCAT ACGGTTTAAGTGGGGTTTTTACGGGTGGAGCAGCTATTTTATTCGCTTTCACGGGTTTTGATATATTAGCAACTTCAGCA GAAGAAGTAAAAGATCCGAAACGTAATCTTCCCATCGGTATTATTGCATCATTAATCATATGTACAATTATTTATGTTAT CGTATGCCTTGTTATGACAGGAATGGTTTCCTATAAAGAATTAAATGTTCCTGAGGCAATGGCTTATGTAATGGAAGTGG TAGGACAAGGGAAAGTCGCTGGTGCAATTGCTGCAGGTGCTGTAATTGGCCTTATGGCTGTTATTTTTTCCAATATGTAT GCGGCAACACGAGTATTCTTTGCAATGAGTCGTGATGGATTGTTACCGAAATCATTTGCGAAAGTTAATAAGAAAACTGG AGCACCCACTTTTATAACTGGATTGGCAGGAATAGGGAGCTCTATAATAGCTGGGTTTATTGATTTGAAAGAATTGGTTA ATTTAGTTAATATCGGTAGTTTGGTGACGTTTGCGTTAGTTTGTCTATCAGTTATTATTCTCCGTAAATCACACCCAAAT TTAAAACGTGGATTTATGGTACCTTTTGTACCTGTATTACCAAGCGTTTCAATTGTTTGTTGTGTGTTTTTAATGCTAAA TTTACCGTTAAGAACATGGATGTACTTTAGTATTTGGATTACTATTGGGGCAGTCATATATTTCGTTTATTCGATAAAAC ACAGTAATTTAAATGAGGAAACGATCTCGAAATTACATGATAAAATTGCGAGATAA
Upstream 100 bases:
>100_bases AATGTAAAAGAAATATTATGAGGCTAGTTAATAACTAAGTAAATTTATATACAACAATAATGAGAAGAGCAAACCTTATT TTAAAGGGGATACAGAGAAT
Downstream 100 bases:
>100_bases TAACGATAGAAAATTGTATTAATAATCATATTAATAGTTGAGTAACATAGAAATAGTTTTTTAACATTTATCAAGAAATA AAATGAAAAATCCTAGGACA
Product: amino acid permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSKLLKKKSVTQLLEHNQSKALTKTLGAFDLIMLGVGSIIGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAE IASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLELPKALVTIPSHGGIVNLPAV IITLVLAWMLSRGTRESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA EEVKDPKRNLPIGIIASLIICTIIYVIVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMY AATRVFFAMSRDGLLPKSFAKVNKKTGAPTFITGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIILRKSHPN LKRGFMVPFVPVLPSVSIVCCVFLMLNLPLRTWMYFSIWITIGAVIYFVYSIKHSNLNEETISKLHDKIAR
Sequences:
>Translated_471_residues MSKLLKKKSVTQLLEHNQSKALTKTLGAFDLIMLGVGSIIGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAE IASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLELPKALVTIPSHGGIVNLPAV IITLVLAWMLSRGTRESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA EEVKDPKRNLPIGIIASLIICTIIYVIVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMY AATRVFFAMSRDGLLPKSFAKVNKKTGAPTFITGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIILRKSHPN LKRGFMVPFVPVLPSVSIVCCVFLMLNLPLRTWMYFSIWITIGAVIYFVYSIKHSNLNEETISKLHDKIAR >Mature_470_residues SKLLKKKSVTQLLEHNQSKALTKTLGAFDLIMLGVGSIIGTGVLVLTGLVAARDAGPAVIFSFVLAAIICGFIALCYAEI ASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATAAVAAGWTGYFHNLIKGFGLELPKALVTIPSHGGIVNLPAVI ITLVLAWMLSRGTRESKRINNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSAE EVKDPKRNLPIGIIASLIICTIIYVIVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVAGAIAAGAVIGLMAVIFSNMYA ATRVFFAMSRDGLLPKSFAKVNKKTGAPTFITGLAGIGSSIIAGFIDLKELVNLVNIGSLVTFALVCLSVIILRKSHPNL KRGFMVPFVPVLPSVSIVCCVFLMLNLPLRTWMYFSIWITIGAVIYFVYSIKHSNLNEETISKLHDKIAR
Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI4507047, Length=433, Percent_Identity=36.4896073903002, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI258645169, Length=423, Percent_Identity=34.7517730496454, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI258614005, Length=423, Percent_Identity=34.2789598108747, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI258614003, Length=423, Percent_Identity=34.2789598108747, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI181337167, Length=418, Percent_Identity=33.2535885167464, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI110347453, Length=404, Percent_Identity=35.1485148514851, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI114326544, Length=427, Percent_Identity=31.1475409836066, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI114326550, Length=427, Percent_Identity=31.1475409836066, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI33286428, Length=402, Percent_Identity=26.865671641791, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI7657683, Length=426, Percent_Identity=26.056338028169, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI186910308, Length=421, Percent_Identity=23.2779097387173, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI186910306, Length=421, Percent_Identity=23.2779097387173, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI186910304, Length=421, Percent_Identity=23.2779097387173, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI115648063, Length=433, Percent_Identity=23.5565819861432, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI115648022, Length=433, Percent_Identity=23.5565819861432, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI187423910, Length=480, Percent_Identity=25.2083333333333, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI7657591, Length=480, Percent_Identity=25.2083333333333, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI71979932, Length=199, Percent_Identity=27.1356783919598, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI9790235, Length=302, Percent_Identity=23.5099337748344, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI87082023, Length=455, Percent_Identity=28.1318681318681, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87081708, Length=485, Percent_Identity=21.8556701030928, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788480, Length=460, Percent_Identity=23.0434782608696, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081869, Length=391, Percent_Identity=25.0639386189258, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790653, Length=421, Percent_Identity=23.9904988123515, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI2367353, Length=459, Percent_Identity=23.3115468409586, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786694, Length=328, Percent_Identity=25.9146341463415, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789017, Length=362, Percent_Identity=23.4806629834254, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786908, Length=396, Percent_Identity=24.7474747474747, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082250, Length=351, Percent_Identity=25.3561253561254, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532491, Length=546, Percent_Identity=29.4871794871795, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17531343, Length=411, Percent_Identity=33.0900243309002, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17533459, Length=502, Percent_Identity=30.0796812749004, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI71982612, Length=404, Percent_Identity=24.009900990099, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI71982608, Length=404, Percent_Identity=24.009900990099, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17568033, Length=420, Percent_Identity=21.6666666666667, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI32566699, Length=345, Percent_Identity=27.2463768115942, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537453, Length=370, Percent_Identity=23.7837837837838, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17540018, Length=207, Percent_Identity=28.0193236714976, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193208714, Length=417, Percent_Identity=24.4604316546763, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32566695, Length=417, Percent_Identity=24.4604316546763, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71993915, Length=408, Percent_Identity=22.5490196078431, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71995388, Length=419, Percent_Identity=22.4343675417661, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71995382, Length=419, Percent_Identity=22.4343675417661, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319543, Length=364, Percent_Identity=24.1758241758242, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI24666159, Length=422, Percent_Identity=36.0189573459716, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI221512776, Length=422, Percent_Identity=36.0189573459716, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24668806, Length=422, Percent_Identity=35.5450236966825, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI21356285, Length=422, Percent_Identity=35.5450236966825, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24668802, Length=422, Percent_Identity=35.5450236966825, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24667468, Length=409, Percent_Identity=35.4523227383863, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI161077963, Length=403, Percent_Identity=35.7320099255583, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI281366235, Length=414, Percent_Identity=32.8502415458937, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI116007820, Length=414, Percent_Identity=32.8502415458937, Blast_Score=201, Evalue=7e-52, Organism=Drosophila melanogaster, GI116007818, Length=416, Percent_Identity=32.9326923076923, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI85725152, Length=416, Percent_Identity=32.9326923076923, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI21357367, Length=439, Percent_Identity=24.373576309795, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI221331183, Length=419, Percent_Identity=26.2529832935561, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI17647653, Length=419, Percent_Identity=26.2529832935561, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24664379, Length=419, Percent_Identity=26.2529832935561, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24651635, Length=398, Percent_Identity=24.6231155778894, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24651633, Length=398, Percent_Identity=24.6231155778894, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI45550968, Length=457, Percent_Identity=26.2582056892779, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI19921172, Length=457, Percent_Identity=26.2582056892779, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24641993, Length=423, Percent_Identity=24.5862884160757, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641995, Length=423, Percent_Identity=24.5862884160757, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR015606 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50512; Mature: 50380
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLKKKSVTQLLEHNQSKALTKTLGAFDLIMLGVGSIIGTGVLVLTGLVAARDAGPAV CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IFSFVLAAIICGFIALCYAEIASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAGWTGYFHNLIKGFGLELPKALVTIPSHGGIVNLPAVIITLVLAWMLSRGTRESKRI HHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH NNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCH EEVKDPKRNLPIGIIASLIICTIIYVIVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVA HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH GAIAAGAVIGLMAVIFSNMYAATRVFFAMSRDGLLPKSFAKVNKKTGAPTFITGLAGIGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SIIAGFIDLKELVNLVNIGSLVTFALVCLSVIILRKSHPNLKRGFMVPFVPVLPSVSIVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHH CVFLMLNLPLRTWMYFSIWITIGAVIYFVYSIKHSNLNEETISKLHDKIAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SKLLKKKSVTQLLEHNQSKALTKTLGAFDLIMLGVGSIIGTGVLVLTGLVAARDAGPAV CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IFSFVLAAIICGFIALCYAEIASTLPASGSVYTYSYATIGEFVAHLVGWSLLLIYIVATA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAGWTGYFHNLIKGFGLELPKALVTIPSHGGIVNLPAVIITLVLAWMLSRGTRESKRI HHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHH NNIMVLIKIGMILLFITVGIFYVKPMNWIPIAPYGLSGVFTGGAAILFAFTGFDILATSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCH EEVKDPKRNLPIGIIASLIICTIIYVIVCLVMTGMVSYKELNVPEAMAYVMEVVGQGKVA HHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH GAIAAGAVIGLMAVIFSNMYAATRVFFAMSRDGLLPKSFAKVNKKTGAPTFITGLAGIGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH SIIAGFIDLKELVNLVNIGSLVTFALVCLSVIILRKSHPNLKRGFMVPFVPVLPSVSIVC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHH CVFLMLNLPLRTWMYFSIWITIGAVIYFVYSIKHSNLNEETISKLHDKIAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]