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The map label for this gene is ydfF [H]

Identifier: 118478402

GI number: 118478402

Start: 2928847

End: 2929551

Strand: Reverse

Name: ydfF [H]

Synonym: BALH_2767

Alternate gene names: 118478402

Gene position: 2929551-2928847 (Counterclockwise)

Preceding gene: 118478404

Following gene: 118478401

Centisome position: 55.73

GC content: 34.33

Gene sequence:

>705_bases
ATGAATGTATATCCGAATATCTCATATATTGCTAAACTAATTGCTGAACCTACAAGAGCAATCGTCTTAGATTGTTTAAT
GAATAATCAAGCACTACCTGCTAGTGAATTGGCTTATATGGCAAGAGTGTCACATCCAACAATTAGTTCTCATCTTTCTA
AATTAGTAGAGGGGAATCTACTTAAAGTTGAACAACATGGTAGACATCGTTACTATCGACTTGCTAATCAAGAGGTAGCA
GAAGTGCTTGAAAAGTTAGGAACAATCGCACCAACAGTCCAAGTTCGTTCTTTAAAACAATCGGATCAACTAAAACAAGT
TCGTTATGCTCGAACTTGCTATGATCATCTTGCAGGCAAACTTGGTGTAGAGATAGCTGAAAAATTACTACATAGGAAAT
TTATCATTTTAGAGGAAGGAGAATATATTGTAACGGAACAAGGTAAGAAATGGTTTCTGAATTTTGGAATAAATATTGAA
AAGGCAAATATAAAAAGGAGAATATTTGCAAAACCTTGTCTTGATTGGAGTGAAAGACGCTACCATATTTCTGGTTGGTT
AGGATCTGCAATAGCAAAACTATTTTTTGAACAGGAATGGATTACAAAGACGGATAAGAATCGGGCTGTCCATCTTACAA
GAAAAGGTATGAAGTTATTGAAAGACCAATTAGGCATTGACATGGAAAATAAAGAAATGAAATAA

Upstream 100 bases:

>100_bases
AATTTAATATACTAAGATCAATTGCATTCATAATACATTCTCCTTTACTGTTAAATTTAAAATAATTGTATCAATTTAAT
AGTTAGGGTATCATCGAAAT

Downstream 100 bases:

>100_bases
CCTGAGTCTATACAAATGTAGACTCAGGTTATTTCATTTCTTTTAAAAATCTTTAGTGATATTTGCGCACGGCAAATTAA
CCTCGTTTGCTTTACGGAAA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNVYPNISYIAKLIAEPTRAIVLDCLMNNQALPASELAYMARVSHPTISSHLSKLVEGNLLKVEQHGRHRYYRLANQEVA
EVLEKLGTIAPTVQVRSLKQSDQLKQVRYARTCYDHLAGKLGVEIAEKLLHRKFIILEEGEYIVTEQGKKWFLNFGINIE
KANIKRRIFAKPCLDWSERRYHISGWLGSAIAKLFFEQEWITKTDKNRAVHLTRKGMKLLKDQLGIDMENKEMK

Sequences:

>Translated_234_residues
MNVYPNISYIAKLIAEPTRAIVLDCLMNNQALPASELAYMARVSHPTISSHLSKLVEGNLLKVEQHGRHRYYRLANQEVA
EVLEKLGTIAPTVQVRSLKQSDQLKQVRYARTCYDHLAGKLGVEIAEKLLHRKFIILEEGEYIVTEQGKKWFLNFGINIE
KANIKRRIFAKPCLDWSERRYHISGWLGSAIAKLFFEQEWITKTDKNRAVHLTRKGMKLLKDQLGIDMENKEMK
>Mature_234_residues
MNVYPNISYIAKLIAEPTRAIVLDCLMNNQALPASELAYMARVSHPTISSHLSKLVEGNLLKVEQHGRHRYYRLANQEVA
EVLEKLGTIAPTVQVRSLKQSDQLKQVRYARTCYDHLAGKLGVEIAEKLLHRKFIILEEGEYIVTEQGKKWFLNFGINIE
KANIKRRIFAKPCLDWSERRYHISGWLGSAIAKLFFEQEWITKTDKNRAVHLTRKGMKLLKDQLGIDMENKEMK

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 27062; Mature: 27062

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVYPNISYIAKLIAEPTRAIVLDCLMNNQALPASELAYMARVSHPTISSHLSKLVEGNL
CCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCE
LKVEQHGRHRYYRLANQEVAEVLEKLGTIAPTVQVRSLKQSDQLKQVRYARTCYDHLAGK
EEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVEIAEKLLHRKFIILEEGEYIVTEQGKKWFLNFGINIEKANIKRRIFAKPCLDWSERR
HHHHHHHHHHHHEEEEEECCCEEEECCCCEEEEEECCEEEHHHHHHHHHHCCCCCHHHCE
YHISGWLGSAIAKLFFEQEWITKTDKNRAVHLTRKGMKLLKDQLGIDMENKEMK
EEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNVYPNISYIAKLIAEPTRAIVLDCLMNNQALPASELAYMARVSHPTISSHLSKLVEGNL
CCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCE
LKVEQHGRHRYYRLANQEVAEVLEKLGTIAPTVQVRSLKQSDQLKQVRYARTCYDHLAGK
EEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVEIAEKLLHRKFIILEEGEYIVTEQGKKWFLNFGINIEKANIKRRIFAKPCLDWSERR
HHHHHHHHHHHHEEEEEECCCEEEECCCCEEEEEECCEEEHHHHHHHHHHCCCCCHHHCE
YHISGWLGSAIAKLFFEQEWITKTDKNRAVHLTRKGMKLLKDQLGIDMENKEMK
EEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]