| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478365
Identifier: 118478365
GI number: 118478365
Start: 2895442
End: 2896527
Strand: Reverse
Name: 118478365
Synonym: BALH_2729
Alternate gene names: NA
Gene position: 2896527-2895442 (Counterclockwise)
Preceding gene: 118478366
Following gene: 118478364
Centisome position: 55.1
GC content: 29.65
Gene sequence:
>1086_bases ATGAATCTAGTATTAAAAGAAATAGTGGCGAACAAAACAATATTCATTATGTTATTTATTGGATTTGTATTGACAATATG GCCAATCCTGATCGCAATGTCGACGCGAGATTATTATGATGAGAAATTTTATGATAGTAAAAATGGTTATTTTAATTATT ACTATTCTGTTCAACTTACTAATATGGGGGAAATCAATTTCGAACAATTTCAGACGTTAGTAGAATCTGATTTTAAAAAC GCTAGTGTTATTACAAATGATATTCGTATTACTATTCCGGATATCGGCCACGTAATAATGAATGGTCTCCTTAATAAAAA TTGGTCTCCACCTTTGCTAAAAGGTTCTCAGATGGGACAAGATGAAAAAAATAGTGTAATAGTGGGGAAGAAAATTTATA AGGATATGGAAACAATAAAATTATTTAATAAGGAATATACAGTTAAAGGCGTAGCTGGAGAAAATACTGGATATGAGTAT AATATTAAAATTTACGTCTCTCTAAATGACATGCCAGATGAAGTGAAACAGATGATACAAAAAGATAATACATTCCAAAT GATTGTTCGTTCTAACAAAAACCCTATCAAGGAAATAGAAACTTTCATACAGCATATGAAACAGAACAATAAAGATATAA ATGCCAAAGTGATTAGTGAAAAAGAGAACTATGAGAAGGAAAAAAACTCAAGTGAAGCCGTAGAAGAGTTACTCAGTTTT CCATATAGGCTTTTATGTATAGCTTTCATTACCAGTATAATAGTAAGTTATTATTGGATTTATACGAAGAAAAAAAGTTT GTCGTTAAGGAAAGCTTTGGGAGCAAGTAATGTAAATCTTTTTATTTTTATATTTAGTCAATTATTTTTATGTGCAATCA CTGCATCAGCCTGTGCAATATGCATACAATGGATTTTTAGCATTTTGAGTGAAAATATTATAGAGTTTACAAGTTATAGT ATTAGTTTACAGTCTACTCATATTGTAATGTGTGTATTTCTTTCACTTACTATAGCTTTCATTCTCTCTGTAATACCATT TGTATATGTGCTGAAAAGTGAACCTGCTAAAGCATTAAAGGAGTAA
Upstream 100 bases:
>100_bases GTGCGTACACTTCTAAGGAAATGGTAATTAAATAAAAATCAACAAAAACCGTGAAAAAGGATAAATACCTTTTTCACGGT TTTTAAAATGAGGAGGATAT
Downstream 100 bases:
>100_bases AAACGATGAGAATAAAAAGTGCGTTCATAGCATTAAAAAAGAGATTTCTATTTTCCGTACTTCTTCTAATACAGATTACA TTTGGATTAGCAACTATAAC
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNLVLKEIVANKTIFIMLFIGFVLTIWPILIAMSTRDYYDEKFYDSKNGYFNYYYSVQLTNMGEINFEQFQTLVESDFKN ASVITNDIRITIPDIGHVIMNGLLNKNWSPPLLKGSQMGQDEKNSVIVGKKIYKDMETIKLFNKEYTVKGVAGENTGYEY NIKIYVSLNDMPDEVKQMIQKDNTFQMIVRSNKNPIKEIETFIQHMKQNNKDINAKVISEKENYEKEKNSSEAVEELLSF PYRLLCIAFITSIIVSYYWIYTKKKSLSLRKALGASNVNLFIFIFSQLFLCAITASACAICIQWIFSILSENIIEFTSYS ISLQSTHIVMCVFLSLTIAFILSVIPFVYVLKSEPAKALKE
Sequences:
>Translated_361_residues MNLVLKEIVANKTIFIMLFIGFVLTIWPILIAMSTRDYYDEKFYDSKNGYFNYYYSVQLTNMGEINFEQFQTLVESDFKN ASVITNDIRITIPDIGHVIMNGLLNKNWSPPLLKGSQMGQDEKNSVIVGKKIYKDMETIKLFNKEYTVKGVAGENTGYEY NIKIYVSLNDMPDEVKQMIQKDNTFQMIVRSNKNPIKEIETFIQHMKQNNKDINAKVISEKENYEKEKNSSEAVEELLSF PYRLLCIAFITSIIVSYYWIYTKKKSLSLRKALGASNVNLFIFIFSQLFLCAITASACAICIQWIFSILSENIIEFTSYS ISLQSTHIVMCVFLSLTIAFILSVIPFVYVLKSEPAKALKE >Mature_361_residues MNLVLKEIVANKTIFIMLFIGFVLTIWPILIAMSTRDYYDEKFYDSKNGYFNYYYSVQLTNMGEINFEQFQTLVESDFKN ASVITNDIRITIPDIGHVIMNGLLNKNWSPPLLKGSQMGQDEKNSVIVGKKIYKDMETIKLFNKEYTVKGVAGENTGYEY NIKIYVSLNDMPDEVKQMIQKDNTFQMIVRSNKNPIKEIETFIQHMKQNNKDINAKVISEKENYEKEKNSSEAVEELLSF PYRLLCIAFITSIIVSYYWIYTKKKSLSLRKALGASNVNLFIFIFSQLFLCAITASACAICIQWIFSILSENIIEFTSYS ISLQSTHIVMCVFLSLTIAFILSVIPFVYVLKSEPAKALKE
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41607; Mature: 41607
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVLKEIVANKTIFIMLFIGFVLTIWPILIAMSTRDYYDEKFYDSKNGYFNYYYSVQLT CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEEEEE NMGEINFEQFQTLVESDFKNASVITNDIRITIPDIGHVIMNGLLNKNWSPPLLKGSQMGQ CCCCCCHHHHHHHHHHCCCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC DEKNSVIVGKKIYKDMETIKLFNKEYTVKGVAGENTGYEYNIKIYVSLNDMPDEVKQMIQ CCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHH KDNTFQMIVRSNKNPIKEIETFIQHMKQNNKDINAKVISEKENYEKEKNSSEAVEELLSF CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHC PYRLLCIAFITSIIVSYYWIYTKKKSLSLRKALGASNVNLFIFIFSQLFLCAITASACAI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH CIQWIFSILSENIIEFTSYSISLQSTHIVMCVFLSLTIAFILSVIPFVYVLKSEPAKALK HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC E C >Mature Secondary Structure MNLVLKEIVANKTIFIMLFIGFVLTIWPILIAMSTRDYYDEKFYDSKNGYFNYYYSVQLT CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEEEEE NMGEINFEQFQTLVESDFKNASVITNDIRITIPDIGHVIMNGLLNKNWSPPLLKGSQMGQ CCCCCCHHHHHHHHHHCCCCCEEEECCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC DEKNSVIVGKKIYKDMETIKLFNKEYTVKGVAGENTGYEYNIKIYVSLNDMPDEVKQMIQ CCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHH KDNTFQMIVRSNKNPIKEIETFIQHMKQNNKDINAKVISEKENYEKEKNSSEAVEELLSF CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHCCCHHHHHHHHHHC PYRLLCIAFITSIIVSYYWIYTKKKSLSLRKALGASNVNLFIFIFSQLFLCAITASACAI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH CIQWIFSILSENIIEFTSYSISLQSTHIVMCVFLSLTIAFILSVIPFVYVLKSEPAKALK HHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA