| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yfiS [H]
Identifier: 118478047
GI number: 118478047
Start: 2573631
End: 2574935
Strand: Direct
Name: yfiS [H]
Synonym: BALH_2399
Alternate gene names: 118478047
Gene position: 2573631-2574935 (Clockwise)
Preceding gene: 118478046
Following gene: 118478049
Centisome position: 48.96
GC content: 30.27
Gene sequence:
>1305_bases ATGGCAAGTTTACGGTTACATATAGAAAATAAAAAAAGCAACCAAGAACTAAAAAATATTTGTTTATATTCAATTGCAAA AACAGTATCAATATTCGGTAGCTCTATTTATAGTTTCGCATTAGGATTGTATGTATTACAAATAACCGGATCTGCTTTAA ATTTCGCGATTACGCTTATTCTAGGAACGATTCCAATGATTGTTATGAATCCATTTGCCGGTGTAATTGCTGATAAGGTT GATAAAAAGAAACTCGTCGTTTGTATGGATGTACTAAGCGGATGCTTATTAATAACTGTTTATATATTAAGCAGCTATTA TGGGTTAAACTTATTCATCATTTATACTACTACCTTTCTTATGACGGTATTTACAACCTTTTTTGGAATAGGATTAGAAG CTGCAAAACCAAATATCGTCTCTAAAGAGAGACTAATGAGGCTTAACTCTATAAGTAAAATTATCGACTCTATATCTTTA ATTCTAGGACCTATGTTAGGGGGCATTGTTTTTGCAGTCTTTGATATGAAAACTTTTATAATTATTAACGGTATTTCATT TATCCTTTCGGCTATATCCATATTGTTTATCAACTTTAAATTGTGCGAGCAATACATAAATGAGGAATGTTCAATTAGAG AAATTAAATTTATTAAAGATATAAAGGAGGGATACTCTTACTTAATGGAGCGGGAAAGCTTAAAAAATACGTTTCGTATT TTAATTTCACTTAATTTTTTCCTAGGATTTGCTGTAACTGTTCCATTGCCATACATTATTAATACAGTTCTCAATCTTAG TTCTAAACATTTTGGTTTGATCCAAGGGACTTTTCCAATAGGTATGATAGTTGGTGCAATAATAGTAAAAAAGATAACGA ATCATTTTTCTTATTCCTATCTATTGAAAAAAATAAGTTTTATGGTGGCAATTTTTATGATAGTTTCAGGTGCACCTGTT CTATTTAAAAGTATTGAAGTGAATAAAATTGTATTTGTGACTATGTACTGCGCCATTATGTTCTTTTTAGGGTTAATGAT AGCATTAATTGATATCCCTTTAATTTATTTTATGCAAAGAGAGATTCCAGATGAATATAGGGGCAGAGTGCTTAGTATTG GATTAAGTTTAGGTAAAATGATGCAGCCGATAGCACTGGCATTATCAGGTTTATTATTAAATCATATTCCATCCTACACG CTTCCAATTGGAGGAGGGATCGTATTTCTTATTTTAAATCAGGCTTACTCAAATAAATTGAATTTAGAAATTCATTCAAA AGGGTATAGTGTTGAACGTAATTAA
Upstream 100 bases:
>100_bases TTATTTCCCCTTAAAATTATTCAAATCGTACATATTGCGATTGGGTTGACCCAAGAACTTACAATGTACGTAATACAAAA TTAGGCAGGGGGAAAAAGTT
Downstream 100 bases:
>100_bases ATAATACCGAAATAGCGCAGGATCATCATCCTGCGCTTATCTATCGTAATTCAGCTGTTTTTCTAATAACAATCTTATCA ATATCATCTTCTTCATCACC
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MASLRLHIENKKSNQELKNICLYSIAKTVSIFGSSIYSFALGLYVLQITGSALNFAITLILGTIPMIVMNPFAGVIADKV DKKKLVVCMDVLSGCLLITVYILSSYYGLNLFIIYTTTFLMTVFTTFFGIGLEAAKPNIVSKERLMRLNSISKIIDSISL ILGPMLGGIVFAVFDMKTFIIINGISFILSAISILFINFKLCEQYINEECSIREIKFIKDIKEGYSYLMERESLKNTFRI LISLNFFLGFAVTVPLPYIINTVLNLSSKHFGLIQGTFPIGMIVGAIIVKKITNHFSYSYLLKKISFMVAIFMIVSGAPV LFKSIEVNKIVFVTMYCAIMFFLGLMIALIDIPLIYFMQREIPDEYRGRVLSIGLSLGKMMQPIALALSGLLLNHIPSYT LPIGGGIVFLILNQAYSNKLNLEIHSKGYSVERN
Sequences:
>Translated_434_residues MASLRLHIENKKSNQELKNICLYSIAKTVSIFGSSIYSFALGLYVLQITGSALNFAITLILGTIPMIVMNPFAGVIADKV DKKKLVVCMDVLSGCLLITVYILSSYYGLNLFIIYTTTFLMTVFTTFFGIGLEAAKPNIVSKERLMRLNSISKIIDSISL ILGPMLGGIVFAVFDMKTFIIINGISFILSAISILFINFKLCEQYINEECSIREIKFIKDIKEGYSYLMERESLKNTFRI LISLNFFLGFAVTVPLPYIINTVLNLSSKHFGLIQGTFPIGMIVGAIIVKKITNHFSYSYLLKKISFMVAIFMIVSGAPV LFKSIEVNKIVFVTMYCAIMFFLGLMIALIDIPLIYFMQREIPDEYRGRVLSIGLSLGKMMQPIALALSGLLLNHIPSYT LPIGGGIVFLILNQAYSNKLNLEIHSKGYSVERN >Mature_433_residues ASLRLHIENKKSNQELKNICLYSIAKTVSIFGSSIYSFALGLYVLQITGSALNFAITLILGTIPMIVMNPFAGVIADKVD KKKLVVCMDVLSGCLLITVYILSSYYGLNLFIIYTTTFLMTVFTTFFGIGLEAAKPNIVSKERLMRLNSISKIIDSISLI LGPMLGGIVFAVFDMKTFIIINGISFILSAISILFINFKLCEQYINEECSIREIKFIKDIKEGYSYLMERESLKNTFRIL ISLNFFLGFAVTVPLPYIINTVLNLSSKHFGLIQGTFPIGMIVGAIIVKKITNHFSYSYLLKKISFMVAIFMIVSGAPVL FKSIEVNKIVFVTMYCAIMFFLGLMIALIDIPLIYFMQREIPDEYRGRVLSIGLSLGKMMQPIALALSGLLLNHIPSYTL PIGGGIVFLILNQAYSNKLNLEIHSKGYSVERN
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48501; Mature: 48370
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLRLHIENKKSNQELKNICLYSIAKTVSIFGSSIYSFALGLYVLQITGSALNFAITLI CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LGTIPMIVMNPFAGVIADKVDKKKLVVCMDVLSGCLLITVYILSSYYGLNLFIIYTTTFL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MTVFTTFFGIGLEAAKPNIVSKERLMRLNSISKIIDSISLILGPMLGGIVFAVFDMKTFI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IINGISFILSAISILFINFKLCEQYINEECSIREIKFIKDIKEGYSYLMERESLKNTFRI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLNFFLGFAVTVPLPYIINTVLNLSSKHFGLIQGTFPIGMIVGAIIVKKITNHFSYSY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLKKISFMVAIFMIVSGAPVLFKSIEVNKIVFVTMYCAIMFFLGLMIALIDIPLIYFMQR HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIPDEYRGRVLSIGLSLGKMMQPIALALSGLLLNHIPSYTLPIGGGIVFLILNQAYSNKL HCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHCCEE NLEIHSKGYSVERN EEEEECCCCCCCCC >Mature Secondary Structure ASLRLHIENKKSNQELKNICLYSIAKTVSIFGSSIYSFALGLYVLQITGSALNFAITLI CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LGTIPMIVMNPFAGVIADKVDKKKLVVCMDVLSGCLLITVYILSSYYGLNLFIIYTTTFL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MTVFTTFFGIGLEAAKPNIVSKERLMRLNSISKIIDSISLILGPMLGGIVFAVFDMKTFI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IINGISFILSAISILFINFKLCEQYINEECSIREIKFIKDIKEGYSYLMERESLKNTFRI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISLNFFLGFAVTVPLPYIINTVLNLSSKHFGLIQGTFPIGMIVGAIIVKKITNHFSYSY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLKKISFMVAIFMIVSGAPVLFKSIEVNKIVFVTMYCAIMFFLGLMIALIDIPLIYFMQR HHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIPDEYRGRVLSIGLSLGKMMQPIALALSGLLLNHIPSYTLPIGGGIVFLILNQAYSNKL HCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEEHHHCCEE NLEIHSKGYSVERN EEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]