Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ywpJ [H]
Identifier: 118478019
GI number: 118478019
Start: 2541522
End: 2542373
Strand: Direct
Name: ywpJ [H]
Synonym: BALH_2370
Alternate gene names: 118478019
Gene position: 2541522-2542373 (Clockwise)
Preceding gene: 118478018
Following gene: 118478020
Centisome position: 48.34
GC content: 33.22
Gene sequence:
>852_bases ATGAAATTAATCGCAATTGATTTAGATGGAACCCTTCTTTCGGGGAATAAAATGATTAGTAAAGAGAATGCAGAAGCGAT TCGAAAATGCCAGGAAGCGGGCCATGTTGTGGCAATTTGTACAGGACGTTCTATAGTCGACATTGAACGATTGTTGCTAG AAGTGAATTTAGAGTGTCCAATTATTGCTGAAAATGGTGCGCTTATATATAAAGATAAAAAAATGATGAAACGATATCCA ATTCAAAATATGCAAGCACTTGAGATTGTGAATTATCTTGAAGAGAATGGTTTATATTATCAGCTTTATACTGATAAAGG TGTGTACGTACCAGATTATGGAGTAGAGAGTGTACGTAATGAAATAGAATATGTGAAGAATTCAAAAGAAAATTTCGACT TGAAAGAATTAGAAACGATTGCAGCATTATACCTTGAACATACAGCGTTTCTTAGTGCAGAAAGTTGTAAACCAATTGTA GAAACTGATATACACGTGCATAAGCTTTTACCATTTTCTTATGACATGGAAAAATTAAAAAAGTTAAAAGAAACGTTTCT GCATAATACGGATTTAGCAATTACATCTTCATATTGGCATAATTTAGAGATTAATCACCGAGATGCTCAAAAAGGAAATG GACTATATACTTTAGCAGAACATCTGAATATTCCAGTTGAAAATACTGTAGCAATAGGTGATGGGCTGAACGATGTATCT ATGATGGAAAAAGCAAATATATCAATTGCAATGGGAAATGCAGTTGAAGAAATAAAAGCGATGTGTCAATACGAAACATT GACTAATGAAGAACACGGTGTCGCACACGCTTTATATAAATATGTAATGTAA
Upstream 100 bases:
>100_bases TCATAAATTATAAATAAGGAGTACTTCACGAAATCAGTATGAAAACGATACCTTTCGTTTAATATAAATTCGTGTATATA TAGAAAGTGGTGAAGAAATA
Downstream 100 bases:
>100_bases TATAAAAAGAAAAAAAGAATCTAAATAGATTCTTTTTTTCTTTTTATTAGGGGTAAGGTATTCTATGAGATTCATAGAAG CCTTATTACATTTTATTATA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKLIAIDLDGTLLSGNKMISKENAEAIRKCQEAGHVVAICTGRSIVDIERLLLEVNLECPIIAENGALIYKDKKMMKRYP IQNMQALEIVNYLEENGLYYQLYTDKGVYVPDYGVESVRNEIEYVKNSKENFDLKELETIAALYLEHTAFLSAESCKPIV ETDIHVHKLLPFSYDMEKLKKLKETFLHNTDLAITSSYWHNLEINHRDAQKGNGLYTLAEHLNIPVENTVAIGDGLNDVS MMEKANISIAMGNAVEEIKAMCQYETLTNEEHGVAHALYKYVM
Sequences:
>Translated_283_residues MKLIAIDLDGTLLSGNKMISKENAEAIRKCQEAGHVVAICTGRSIVDIERLLLEVNLECPIIAENGALIYKDKKMMKRYP IQNMQALEIVNYLEENGLYYQLYTDKGVYVPDYGVESVRNEIEYVKNSKENFDLKELETIAALYLEHTAFLSAESCKPIV ETDIHVHKLLPFSYDMEKLKKLKETFLHNTDLAITSSYWHNLEINHRDAQKGNGLYTLAEHLNIPVENTVAIGDGLNDVS MMEKANISIAMGNAVEEIKAMCQYETLTNEEHGVAHALYKYVM >Mature_283_residues MKLIAIDLDGTLLSGNKMISKENAEAIRKCQEAGHVVAICTGRSIVDIERLLLEVNLECPIIAENGALIYKDKKMMKRYP IQNMQALEIVNYLEENGLYYQLYTDKGVYVPDYGVESVRNEIEYVKNSKENFDLKELETIAALYLEHTAFLSAESCKPIV ETDIHVHKLLPFSYDMEKLKKLKETFLHNTDLAITSSYWHNLEINHRDAQKGNGLYTLAEHLNIPVENTVAIGDGLNDVS MMEKANISIAMGNAVEEIKAMCQYETLTNEEHGVAHALYKYVM
Specific function: Putative phosphatase (Potential) [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI1786982, Length=288, Percent_Identity=27.0833333333333, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI2367265, Length=298, Percent_Identity=28.1879194630872, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 32111; Mature: 32111
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLIAIDLDGTLLSGNKMISKENAEAIRKCQEAGHVVAICTGRSIVDIERLLLEVNLECP CEEEEEECCCEEECCCCEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC IIAENGALIYKDKKMMKRYPIQNMQALEIVNYLEENGLYYQLYTDKGVYVPDYGVESVRN EEECCCEEEEECHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCEECCCCCHHHHHH EIEYVKNSKENFDLKELETIAALYLEHTAFLSAESCKPIVETDIHVHKLLPFSYDMEKLK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHH KLKETFLHNTDLAITSSYWHNLEINHRDAQKGNGLYTLAEHLNIPVENTVAIGDGLNDVS HHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCEEEEHHHCCCCCCCEEEECCCCCHHH MMEKANISIAMGNAVEEIKAMCQYETLTNEEHGVAHALYKYVM HHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MKLIAIDLDGTLLSGNKMISKENAEAIRKCQEAGHVVAICTGRSIVDIERLLLEVNLECP CEEEEEECCCEEECCCCEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC IIAENGALIYKDKKMMKRYPIQNMQALEIVNYLEENGLYYQLYTDKGVYVPDYGVESVRN EEECCCEEEEECHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCCEECCCCCHHHHHH EIEYVKNSKENFDLKELETIAALYLEHTAFLSAESCKPIVETDIHVHKLLPFSYDMEKLK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHH KLKETFLHNTDLAITSSYWHNLEINHRDAQKGNGLYTLAEHLNIPVENTVAIGDGLNDVS HHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCEEEEHHHCCCCCCCEEEECCCCCHHH MMEKANISIAMGNAVEEIKAMCQYETLTNEEHGVAHALYKYVM HHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]