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The map label for this gene is lysS [H]

Identifier: 118477986

GI number: 118477986

Start: 2503144

End: 2504697

Strand: Direct

Name: lysS [H]

Synonym: BALH_2333

Alternate gene names: 118477986

Gene position: 2503144-2504697 (Clockwise)

Preceding gene: 118477983

Following gene: 118477988

Centisome position: 47.61

GC content: 31.21

Gene sequence:

>1554_bases
ATGCATTGGGCGTATGAAGTAGCACTTGAATTAATTAGAAAACATCCAAATAAAGAAACTTTTGTTTGCGCATCTGGAAT
TAGTCCATCAGGTTCTGTTCATATTGGGAACTTTCGTGAAATCGTAACGACTTATTTTGTTGTAAGGGCGCTTCAAGATT
TAGGAAAAAAGACTCGTTTTATATTTTCATGGGATGATTACGACAGGTTTAGAAAAGTCCCTAAAAATATTGATCCCTCA
TTTGTAAAGTATATCGGAATGCCATACTGTGATATACCAGATCCGTATGGGTGTCATAATTCATATGCCGAGCATTTTGA
AAAAGAGTTTGAAAAATCGCTTCAAGCATTTGGAATTGAAGTAGAATTTATTTATCAACATGATGAATATAGAAATGGAA
GATATAACAAAAGCATATTAGAAGCTTTGTATAAAAGAAAAGAAATATATGATGTTTTAATGGATTTTAAAACTGGGGAG
TGTAGTGAAGAAGAGCGAGAGCGTTTTTATCCAGTTACATTGTATTGTGAGAGATGCGGGAAAGATACAACTACAATTAC
ACATTTTGATGAAGCATTAAAAACAGTTCGATATGAATGTGAATGTGGAAATCAAAATGAATTATCGATACTAAATACAA
ATAAAATGAAACTGAATTGGAAAATTGATTGGCCGATGAGATGGATGATAGAGGATGTTATTTTTGAGCCGGGCGGAAGA
GACCATTCATCAGAAACAGGTAGTTATAATGTATCAAAGGAAATTGCAAGGAAAATATTTAATCGTGAAGCTCCGCATTA
CGTTGCTTATGATTTCATTGGTATTAAAGGGAATCATGAAAAAATGTCTAGTTCCTCAGGGAATAGTATTACACCTAGCG
AGTTGTTAAAAGTGTATTTACCAGAAGTAATTCTATTCATGTTTGCTAAATATAGACCCAATGCAGCTTTCCATATCAGT
CTTGATGAAGATGTGATTCGTAATTATACGGAGTATGAACGACTGAAAGGTAGTTATGAAAATAAAACACTCAAAAATGA
AGATTTGTTTGATGCAATTAAACTTTCTAGAGCTGAGAACGGATTTAAAGAATATCCAAAATTTAATCAAGTAGCTGGAA
CGTTGCCGTTATTACATTTTGACTCATTTATTTTACAGGGGATATTAGAGAAAATAGATAGGAGTTATGGATTAGATGAA
ATGAAATCGATAAGTAATCGTGCAGAATATTGGATAAGAAAATTTCAATCTGAAAAATTAATTGAGGTAAATCAGGAGAA
AAATACAGAGTTTTACAACACGTTAGATAAAAGTCAGAAAGAATGGCTAGTAGAAGTTTGTGAAATATTGCGTTCAAATA
AAGATTATTCAAACATAATGGAACAATTATATTCGATTTGTCATCATGAAAATAAAAAAATAATGAAAGAAAATCAAAAA
CAGTTATTCACTATTATATATATGCTCATTATAAATCAATCAAATGGTCCTCGTATACCATTATTAATACATGTGGTAGG
TATAGAAAAAAGCATCGCATTATTAGATTTCTAA

Upstream 100 bases:

>100_bases
CAACTCTCGTCCTCAAGATGAATAATCTTGGGGGTGGGAGTTTTTTTATTGCATAAAATTGAAAATGTGAAAACAAAAAA
ACGATAGAGGTGAGTAACAT

Downstream 100 bases:

>100_bases
TACACAGTTAAAAGCAACGCAAGTACCGAATTTTCTAGGTACTTGCGTTGTAAATTTTACTACCGTGAATACAATTTCGG
ACATTCATTACCACTAGGTT

Product: lysyl-tRNA synthetase

Products: NA

Alternate protein names: Lysine--tRNA ligase; LysRS [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MHWAYEVALELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYDRFRKVPKNIDPS
FVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHDEYRNGRYNKSILEALYKRKEIYDVLMDFKTGE
CSEEERERFYPVTLYCERCGKDTTTITHFDEALKTVRYECECGNQNELSILNTNKMKLNWKIDWPMRWMIEDVIFEPGGR
DHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSITPSELLKVYLPEVILFMFAKYRPNAAFHIS
LDEDVIRNYTEYERLKGSYENKTLKNEDLFDAIKLSRAENGFKEYPKFNQVAGTLPLLHFDSFILQGILEKIDRSYGLDE
MKSISNRAEYWIRKFQSEKLIEVNQEKNTEFYNTLDKSQKEWLVEVCEILRSNKDYSNIMEQLYSICHHENKKIMKENQK
QLFTIIYMLIINQSNGPRIPLLIHVVGIEKSIALLDF

Sequences:

>Translated_517_residues
MHWAYEVALELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYDRFRKVPKNIDPS
FVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHDEYRNGRYNKSILEALYKRKEIYDVLMDFKTGE
CSEEERERFYPVTLYCERCGKDTTTITHFDEALKTVRYECECGNQNELSILNTNKMKLNWKIDWPMRWMIEDVIFEPGGR
DHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSITPSELLKVYLPEVILFMFAKYRPNAAFHIS
LDEDVIRNYTEYERLKGSYENKTLKNEDLFDAIKLSRAENGFKEYPKFNQVAGTLPLLHFDSFILQGILEKIDRSYGLDE
MKSISNRAEYWIRKFQSEKLIEVNQEKNTEFYNTLDKSQKEWLVEVCEILRSNKDYSNIMEQLYSICHHENKKIMKENQK
QLFTIIYMLIINQSNGPRIPLLIHVVGIEKSIALLDF
>Mature_517_residues
MHWAYEVALELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYDRFRKVPKNIDPS
FVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHDEYRNGRYNKSILEALYKRKEIYDVLMDFKTGE
CSEEERERFYPVTLYCERCGKDTTTITHFDEALKTVRYECECGNQNELSILNTNKMKLNWKIDWPMRWMIEDVIFEPGGR
DHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSITPSELLKVYLPEVILFMFAKYRPNAAFHIS
LDEDVIRNYTEYERLKGSYENKTLKNEDLFDAIKLSRAENGFKEYPKFNQVAGTLPLLHFDSFILQGILEKIDRSYGLDE
MKSISNRAEYWIRKFQSEKLIEVNQEKNTEFYNTLDKSQKEWLVEVCEILRSNKDYSNIMEQLYSICHHENKKIMKENQK
QLFTIIYMLIINQSNGPRIPLLIHVVGIEKSIALLDF

Specific function: Unknown

COG id: COG1384

COG function: function code J; Lysyl-tRNA synthetase (class I)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008925
- InterPro:   IPR020751
- InterPro:   IPR001412
- InterPro:   IPR002904
- InterPro:   IPR020754
- InterPro:   IPR020756
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01921 tRNA-synt_1f [H]

EC number: =6.1.1.6 [H]

Molecular weight: Translated: 60939; Mature: 60939

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00125 SER_THR_PHOSPHATASE ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHWAYEVALELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRF
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEE
IFSWDDYDRFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE
EEEECCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
VEFIYQHDEYRNGRYNKSILEALYKRKEIYDVLMDFKTGECSEEERERFYPVTLYCERCG
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEHHCC
KDTTTITHFDEALKTVRYECECGNQNELSILNTNKMKLNWKIDWPMRWMIEDVIFEPGGR
CCCCCHHHHHHHHHHHEEEECCCCCCCEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCC
DHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSITPSELLKVYL
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHH
PEVILFMFAKYRPNAAFHISLDEDVIRNYTEYERLKGSYENKTLKNEDLFDAIKLSRAEN
HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
GFKEYPKFNQVAGTLPLLHFDSFILQGILEKIDRSYGLDEMKSISNRAEYWIRKFQSEKL
CHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
IEVNQEKNTEFYNTLDKSQKEWLVEVCEILRSNKDYSNIMEQLYSICHHENKKIMKENQK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QLFTIIYMLIINQSNGPRIPLLIHVVGIEKSIALLDF
HHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEECCC
>Mature Secondary Structure
MHWAYEVALELIRKHPNKETFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRF
CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEE
IFSWDDYDRFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE
EEEECCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE
VEFIYQHDEYRNGRYNKSILEALYKRKEIYDVLMDFKTGECSEEERERFYPVTLYCERCG
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEHHCC
KDTTTITHFDEALKTVRYECECGNQNELSILNTNKMKLNWKIDWPMRWMIEDVIFEPGGR
CCCCCHHHHHHHHHHHEEEECCCCCCCEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCC
DHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSITPSELLKVYL
CCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHH
PEVILFMFAKYRPNAAFHISLDEDVIRNYTEYERLKGSYENKTLKNEDLFDAIKLSRAEN
HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC
GFKEYPKFNQVAGTLPLLHFDSFILQGILEKIDRSYGLDEMKSISNRAEYWIRKFQSEKL
CHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
IEVNQEKNTEFYNTLDKSQKEWLVEVCEILRSNKDYSNIMEQLYSICHHENKKIMKENQK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
QLFTIIYMLIINQSNGPRIPLLIHVVGIEKSIALLDF
HHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]