| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118477932
Identifier: 118477932
GI number: 118477932
Start: 2444391
End: 2445473
Strand: Direct
Name: 118477932
Synonym: BALH_2278
Alternate gene names: NA
Gene position: 2444391-2445473 (Clockwise)
Preceding gene: 118477930
Following gene: 118477933
Centisome position: 46.5
GC content: 27.61
Gene sequence:
>1083_bases GTGAGTCCATTGCGTAAACATTCACATGTGCAATTTTATGTATTAATATTGGCTCTATTAGCTTATTTAAGCTTTTGCTT TATATTTTTATTTGTTTTTCCGAATCTTTATTTTGTATCAGATTTTAATATACGACTCTCATCTTTAGTTGTTGAAACTA TTGTACTTATTTCATTACTCTATTCTATAGTATCCAGAAAAGTTAAGTTAGGAGTATTTTGGACTTGTATTACTATTGCA ATAGGTTGTTTCTTGATAGGGAATTTTTTATCTGCTTTTCAAGTACTTAATATAGAATTACCAATACAAAATTTTAATAT CTCTGATGTGTTTTTGTTGTTTTTCTTATTCTTCTTTCTCTTTGCGTTCTTTTATAAAATCATGATGGAATGTAACAAAT GGGAAAAGGCGTATTTGATTTGTGATTTATGTATTGTTGTTACTGCTATTTTTACCTTAGAGTGGTACCTATTTAATAAA CCTTCTGCAAATATTTTATTCTTATCAATTGGAGATGTTTTTCTTTCATTTATTTTCCCGATTATAGATCTATTGCTTCT ATTACTAGGAGTTAGCCTTGTTTTTCGACCAGCAATTTTTAATGCGAAAAGTAAATTATTTATTTTTATCTTAGTATTAA CTGGCTTGTCTATTACGGACTATTTATATTTCTATTTACAAGATGATTTATCACATCGTTCACTCATATTATTAAGGTGT TTATATAGAATTTTTCTATTATTTATTGCCATTGCCGCTACTATCCCAAGGAGTACATATTCTAGAAGAAACTATTTTAT TATTAATCCGACATTTGGAAAGAAACTTCTTGTCATATTTCCTTATCTTGCAGTTGCAATTTTAATTGGTTTTACTTTAA AAGAGCAAACTGCTTCCTCTACACTGATTACGGGAAATTGTATTGCCTTTGTATTTGTACTGATTCGTCATACAATTGTA CGAATGCAAAACAAAGATTTAACCGAAACATTAAAAGTGTTTAATAATCAATTAGAGAAAAAAGTATCTCAAAGAACAGC GGATTTAATAAAAAAATCTAATGATTTGGTGAAAAATCATTAG
Upstream 100 bases:
>100_bases AAGGTCATAATATGGAGTGTTAGATAACATTCATTTTAATGAATACGATCTCTGTTGCATCAAGACATTTTTAATAAAGG CCTAGAAAAAAATCAAGAAG
Downstream 100 bases:
>100_bases AGGTTTAAGTCCTTATATGAGTACCATCCAGATCCTATATTAACAATTGATCCAAATGGTATCGTATTAAATATAAACCA GTCTGGAAGTATATTATTAG
Product: sensory box/GGDEF family protein
Products: NA
Alternate protein names: Sensory Box/Ggdef Family
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSPLRKHSHVQFYVLILALLAYLSFCFIFLFVFPNLYFVSDFNIRLSSLVVETIVLISLLYSIVSRKVKLGVFWTCITIA IGCFLIGNFLSAFQVLNIELPIQNFNISDVFLLFFLFFFLFAFFYKIMMECNKWEKAYLICDLCIVVTAIFTLEWYLFNK PSANILFLSIGDVFLSFIFPIIDLLLLLLGVSLVFRPAIFNAKSKLFIFILVLTGLSITDYLYFYLQDDLSHRSLILLRC LYRIFLLFIAIAATIPRSTYSRRNYFIINPTFGKKLLVIFPYLAVAILIGFTLKEQTASSTLITGNCIAFVFVLIRHTIV RMQNKDLTETLKVFNNQLEKKVSQRTADLIKKSNDLVKNH
Sequences:
>Translated_360_residues MSPLRKHSHVQFYVLILALLAYLSFCFIFLFVFPNLYFVSDFNIRLSSLVVETIVLISLLYSIVSRKVKLGVFWTCITIA IGCFLIGNFLSAFQVLNIELPIQNFNISDVFLLFFLFFFLFAFFYKIMMECNKWEKAYLICDLCIVVTAIFTLEWYLFNK PSANILFLSIGDVFLSFIFPIIDLLLLLLGVSLVFRPAIFNAKSKLFIFILVLTGLSITDYLYFYLQDDLSHRSLILLRC LYRIFLLFIAIAATIPRSTYSRRNYFIINPTFGKKLLVIFPYLAVAILIGFTLKEQTASSTLITGNCIAFVFVLIRHTIV RMQNKDLTETLKVFNNQLEKKVSQRTADLIKKSNDLVKNH >Mature_359_residues SPLRKHSHVQFYVLILALLAYLSFCFIFLFVFPNLYFVSDFNIRLSSLVVETIVLISLLYSIVSRKVKLGVFWTCITIAI GCFLIGNFLSAFQVLNIELPIQNFNISDVFLLFFLFFFLFAFFYKIMMECNKWEKAYLICDLCIVVTAIFTLEWYLFNKP SANILFLSIGDVFLSFIFPIIDLLLLLLGVSLVFRPAIFNAKSKLFIFILVLTGLSITDYLYFYLQDDLSHRSLILLRCL YRIFLLFIAIAATIPRSTYSRRNYFIINPTFGKKLLVIFPYLAVAILIGFTLKEQTASSTLITGNCIAFVFVLIRHTIVR MQNKDLTETLKVFNNQLEKKVSQRTADLIKKSNDLVKNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41706; Mature: 41575
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLRKHSHVQFYVLILALLAYLSFCFIFLFVFPNLYFVSDFNIRLSSLVVETIVLISLL CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH YSIVSRKVKLGVFWTCITIAIGCFLIGNFLSAFQVLNIELPIQNFNISDVFLLFFLFFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHH FAFFYKIMMECNKWEKAYLICDLCIVVTAIFTLEWYLFNKPSANILFLSIGDVFLSFIFP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHH IIDLLLLLLGVSLVFRPAIFNAKSKLFIFILVLTGLSITDYLYFYLQDDLSHRSLILLRC HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH LYRIFLLFIAIAATIPRSTYSRRNYFIINPTFGKKLLVIFPYLAVAILIGFTLKEQTASS HHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC TLITGNCIAFVFVLIRHTIVRMQNKDLTETLKVFNNQLEKKVSQRTADLIKKSNDLVKNH CEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SPLRKHSHVQFYVLILALLAYLSFCFIFLFVFPNLYFVSDFNIRLSSLVVETIVLISLL CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH YSIVSRKVKLGVFWTCITIAIGCFLIGNFLSAFQVLNIELPIQNFNISDVFLLFFLFFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHH FAFFYKIMMECNKWEKAYLICDLCIVVTAIFTLEWYLFNKPSANILFLSIGDVFLSFIFP HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHH IIDLLLLLLGVSLVFRPAIFNAKSKLFIFILVLTGLSITDYLYFYLQDDLSHRSLILLRC HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHH LYRIFLLFIAIAATIPRSTYSRRNYFIINPTFGKKLLVIFPYLAVAILIGFTLKEQTASS HHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC TLITGNCIAFVFVLIRHTIVRMQNKDLTETLKVFNNQLEKKVSQRTADLIKKSNDLVKNH CEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA