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The map label for this gene is yrbE [H]

Identifier: 118477912

GI number: 118477912

Start: 2419253

End: 2420278

Strand: Direct

Name: yrbE [H]

Synonym: BALH_2257

Alternate gene names: 118477912

Gene position: 2419253-2420278 (Clockwise)

Preceding gene: 118477910

Following gene: 118477913

Centisome position: 46.02

GC content: 37.43

Gene sequence:

>1026_bases
ATGAACGTTTTAAAGATTGGGATTATTGGTGCTGGACGAATTGGGAAACTACATGTTGATAATTTGCAGCTTATGCCACA
AGTGAAAATTAAAGCGGTTTCAGATGTAGTAATTAATCATCTAGAAAAGTGGGCTCAAGATAAAGGAATTTCCACTCTGA
CTACAAACTATCAGGATTTATTAGCAGATCCAGAAATTGATGCTGTCTTTATTTGTTCACCAACAAATATACATGCGCAA
ATTATTAAAGAAGCGGCTCTTGCGAAAAAACATATTTTCTGCGAAAAGCCTGTTAGTTTCTCAGTAGAAGAAACATTAGA
AGCATTAGAAGTGGTAAAAGAACAGGGAGTATCTCTTCAAGTAGGTTTTAATCGTCGTTTTGATCCTAACTTCAGGAAAG
TGTATGATCTGATTCAACAAGGCGAAGTGGGACAGCCGCATATTTTAAAAATTACGTCACGCGATCCACAACCGCCAAGT
ATAGAATATGTTCGCTCTTCAGGCGGATTGTTTATGGATATGATGATTCATGATTTTGATATGGCTCGTTATGTGATGAA
TAGTGAGGTCGTTGAAGTATTTGCATATGGAACAACATTAATTGATTCATCCATTCAGGAAGTAAATGATGTTGATACAG
CAATTGTCACATTAAAATTTGCGAATGGAGCTTTAGGGGTAATTGATAATAGCCGACAAGCTGTTTATGGATATGACCAG
CGTGTGGAGGTGTTTGGTGAAAAAGGCGCAGTTGCTGCGGATAATTGCTGTCCGACAACAGTTCAAGTGTCAAAAACAGA
AGGTATTGTAAAAGATAAGCCGCTTTATTTCTTCTTAGAGCGCTACACGCAAGCTTACATTGAGGAAGTAACACAATTTA
CAAAGTCAATTATAGAAGGACAAGCTGTTATTTGCAGTGGTAATGATGGATTACAAGCAGAGCGAATTGCGAAGGCTGCG
AAGGAATCCTTACTAACAGGAAAACCTGTACAAATTGAACATAAACAGCCTGCATTAAATCAATAA

Upstream 100 bases:

>100_bases
TAATGAAGAAAAATAGGGAAAGCGCTTAACTAATTTGATACGCTAAACCCTATAGACTTTCATTTCGTTTCTTAAATTTT
AATATAGAGGGAGAAATCAT

Downstream 100 bases:

>100_bases
AGAGAGCGCTTACTTATAGATGGATAAAGAGTAATGAATAGTAGGTTTATAAAAATATGAACCATATCATTCATAAAGCA
TGGGAGGTAGTAACAATGAA

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MNVLKIGIIGAGRIGKLHVDNLQLMPQVKIKAVSDVVINHLEKWAQDKGISTLTTNYQDLLADPEIDAVFICSPTNIHAQ
IIKEAALAKKHIFCEKPVSFSVEETLEALEVVKEQGVSLQVGFNRRFDPNFRKVYDLIQQGEVGQPHILKITSRDPQPPS
IEYVRSSGGLFMDMMIHDFDMARYVMNSEVVEVFAYGTTLIDSSIQEVNDVDTAIVTLKFANGALGVIDNSRQAVYGYDQ
RVEVFGEKGAVAADNCCPTTVQVSKTEGIVKDKPLYFFLERYTQAYIEEVTQFTKSIIEGQAVICSGNDGLQAERIAKAA
KESLLTGKPVQIEHKQPALNQ

Sequences:

>Translated_341_residues
MNVLKIGIIGAGRIGKLHVDNLQLMPQVKIKAVSDVVINHLEKWAQDKGISTLTTNYQDLLADPEIDAVFICSPTNIHAQ
IIKEAALAKKHIFCEKPVSFSVEETLEALEVVKEQGVSLQVGFNRRFDPNFRKVYDLIQQGEVGQPHILKITSRDPQPPS
IEYVRSSGGLFMDMMIHDFDMARYVMNSEVVEVFAYGTTLIDSSIQEVNDVDTAIVTLKFANGALGVIDNSRQAVYGYDQ
RVEVFGEKGAVAADNCCPTTVQVSKTEGIVKDKPLYFFLERYTQAYIEEVTQFTKSIIEGQAVICSGNDGLQAERIAKAA
KESLLTGKPVQIEHKQPALNQ
>Mature_341_residues
MNVLKIGIIGAGRIGKLHVDNLQLMPQVKIKAVSDVVINHLEKWAQDKGISTLTTNYQDLLADPEIDAVFICSPTNIHAQ
IIKEAALAKKHIFCEKPVSFSVEETLEALEVVKEQGVSLQVGFNRRFDPNFRKVYDLIQQGEVGQPHILKITSRDPQPPS
IEYVRSSGGLFMDMMIHDFDMARYVMNSEVVEVFAYGTTLIDSSIQEVNDVDTAIVTLKFANGALGVIDNSRQAVYGYDQ
RVEVFGEKGAVAADNCCPTTVQVSKTEGIVKDKPLYFFLERYTQAYIEEVTQFTKSIIEGQAVICSGNDGLQAERIAKAA
KESLLTGKPVQIEHKQPALNQ

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=257, Percent_Identity=24.124513618677, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787574, Length=245, Percent_Identity=24.4897959183673, Blast_Score=71, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581117, Length=200, Percent_Identity=22.5, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37794; Mature: 37794

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKIGIIGAGRIGKLHVDNLQLMPQVKIKAVSDVVINHLEKWAQDKGISTLTTNYQDL
CCEEEEEEEECCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
LADPEIDAVFICSPTNIHAQIIKEAALAKKHIFCEKPVSFSVEETLEALEVVKEQGVSLQ
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCEEE
VGFNRRFDPNFRKVYDLIQQGEVGQPHILKITSRDPQPPSIEYVRSSGGLFMDMMIHDFD
ECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHEEECCCCEEEEHHHHHHH
MARYVMNSEVVEVFAYGTTLIDSSIQEVNDVDTAIVTLKFANGALGVIDNSRQAVYGYDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCEEECCCC
RVEVFGEKGAVAADNCCPTTVQVSKTEGIVKDKPLYFFLERYTQAYIEEVTQFTKSIIEG
EEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QAVICSGNDGLQAERIAKAAKESLLTGKPVQIEHKQPALNQ
CEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MNVLKIGIIGAGRIGKLHVDNLQLMPQVKIKAVSDVVINHLEKWAQDKGISTLTTNYQDL
CCEEEEEEEECCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
LADPEIDAVFICSPTNIHAQIIKEAALAKKHIFCEKPVSFSVEETLEALEVVKEQGVSLQ
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCEEE
VGFNRRFDPNFRKVYDLIQQGEVGQPHILKITSRDPQPPSIEYVRSSGGLFMDMMIHDFD
ECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHEEECCCCEEEEHHHHHHH
MARYVMNSEVVEVFAYGTTLIDSSIQEVNDVDTAIVTLKFANGALGVIDNSRQAVYGYDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEECCCCEEECCCC
RVEVFGEKGAVAADNCCPTTVQVSKTEGIVKDKPLYFFLERYTQAYIEEVTQFTKSIIEG
EEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QAVICSGNDGLQAERIAKAAKESLLTGKPVQIEHKQPALNQ
CEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]