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The map label for this gene is ipdC [H]

Identifier: 118477880

GI number: 118477880

Start: 2381084

End: 2381629

Strand: Reverse

Name: ipdC [H]

Synonym: BALH_2225

Alternate gene names: 118477880

Gene position: 2381629-2381084 (Counterclockwise)

Preceding gene: 118477881

Following gene: 118477879

Centisome position: 45.3

GC content: 35.53

Gene sequence:

>546_bases
TTGTTATATCAGGGTTTTTTTAACCTATCATCTTATATTCTTGATATAAGTTCTCCATACTTGCGTAAAAGAATTGATGA
ATCTGACTGTATTATTAGTATTGGCGTGAAGTTAACTGATACTATTACAGGTGGCTTCACACAAGGTTTTACGAAAGAAC
AAGTTATTGAAATTCATCCCTACACTGTGAAAATTACAGATAAAAAATATGGGCCAGTTGTAATGAAAGATGTTTTACAA
CAGTTAAGTGATGTAATTGAACATCGAAATGAAGAAACGCTTGATATTAAGCCATTTATTTCAGAATCACTATTAATTAC
TGAAAAGTTTAATCCAAAGCTACAAATGGTTACACAAAAACGCTTTTGGCAGCAAATGTACCATTTCTTACAGGAAAACG
ACGTCTTAATTGCAGAGCAAGGAACACCTTTCTTTGGTAGTGCCGGCCGCTATCCCTTTACCAAACAACACTACATATGT
AGCGCAACCATTACGGGGATCGATCGGCTATACATTACCTGCTCTACTTGGTACACAGCTCGCTAA

Upstream 100 bases:

>100_bases
AACATGCAAGAAGAAGCCGTTAAAAACTTTGGTAAAAGCATCTTTGGATAACTTATGTTTGCAAAATGTTTGCAATTCAT
AAAAATAGGTTAAACAAACG

Downstream 100 bases:

>100_bases
TTTATCACGGCGCAACATTTTAATTATTGGTGATGGTTCTTTCCAATTAACTGTCCAAGAGTTATCGACCATACTTCGTC
AAAATTTAAAACCGATTATA

Product: indolepyruvate decarboxylase, central region

Products: NA

Alternate protein names: Indolepyruvate decarboxylase [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLYQGFFNLSSYILDISSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHPYTVKITDKKYGPVVMKDVLQ
QLSDVIEHRNEETLDIKPFISESLLITEKFNPKLQMVTQKRFWQQMYHFLQENDVLIAEQGTPFFGSAGRYPFTKQHYIC
SATITGIDRLYITCSTWYTAR

Sequences:

>Translated_181_residues
MLYQGFFNLSSYILDISSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHPYTVKITDKKYGPVVMKDVLQ
QLSDVIEHRNEETLDIKPFISESLLITEKFNPKLQMVTQKRFWQQMYHFLQENDVLIAEQGTPFFGSAGRYPFTKQHYIC
SATITGIDRLYITCSTWYTAR
>Mature_181_residues
MLYQGFFNLSSYILDISSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHPYTVKITDKKYGPVVMKDVLQ
QLSDVIEHRNEETLDIKPFISESLLITEKFNPKLQMVTQKRFWQQMYHFLQENDVLIAEQGTPFFGSAGRYPFTKQHYIC
SATITGIDRLYITCSTWYTAR

Specific function: Unknown

COG id: COG3961

COG function: function code GHR; Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TPP enzyme family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323163, Length=135, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6323073, Length=135, Percent_Identity=31.8518518518519, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321524, Length=155, Percent_Identity=29.6774193548387, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017764
- InterPro:   IPR012110
- InterPro:   IPR012000
- InterPro:   IPR012001
- InterPro:   IPR000399
- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.74 [H]

Molecular weight: Translated: 21016; Mature: 21016

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYQGFFNLSSYILDISSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHP
CCCCCHHHHHHHEEECCCHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEECC
YTVKITDKKYGPVVMKDVLQQLSDVIEHRNEETLDIKPFISESLLITEKFNPKLQMVTQK
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHH
RFWQQMYHFLQENDVLIAEQGTPFFGSAGRYPFTKQHYICSATITGIDRLYITCSTWYTA
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECEEEC
R
C
>Mature Secondary Structure
MLYQGFFNLSSYILDISSPYLRKRIDESDCIISIGVKLTDTITGGFTQGFTKEQVIEIHP
CCCCCHHHHHHHEEECCCHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEECC
YTVKITDKKYGPVVMKDVLQQLSDVIEHRNEETLDIKPFISESLLITEKFNPKLQMVTQK
EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCHHHHHHHH
RFWQQMYHFLQENDVLIAEQGTPFFGSAGRYPFTKQHYICSATITGIDRLYITCSTWYTA
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECEEEC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2034209 [H]