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The map label for this gene is yodR [H]

Identifier: 118477721

GI number: 118477721

Start: 2207041

End: 2207709

Strand: Direct

Name: yodR [H]

Synonym: BALH_2058

Alternate gene names: 118477721

Gene position: 2207041-2207709 (Clockwise)

Preceding gene: 118477720

Following gene: 118477722

Centisome position: 41.98

GC content: 37.52

Gene sequence:

>669_bases
TTGGAAATGGGTATGGGCGTAGAAGTGAGAGATAAAATTGCTAGACGTGCGGCGAAAGAAATACAGAATGGAATGATTGT
AAATTTAGGTATTGGTATACCATCACTTGTACCCAATCATTTGCCTGACGATATAAACGTTATGTTTCATGCGGAAAATG
GAATTGTAGGTATGGGACCTACGCCAAGTAAAGGAAATGAAGACGAAAATTTATGTAACGCAGCAGGTTTGCCAACTTCT
CTTATTACAGGAGCAAGTTATTTTGATAGTTGCACAGCGTTTGGGATGATTCGAAAAGGTTTACTAGACATAACAATTCT
TGGTTCATTACAAGTAAGTGAGAATGGTGATTTAGCGAACTGGATTGTTCCAGGAAAACGCGTTCCAGGTATTGGGGGAG
CAATGGATTTAGCTCAAAAAGCGAAGCGGGTCGTTGTTGTGATGAATCATGTCGATAAATACGGAAATGCAAAAATTGTT
TCGGAGTGTACATTACCATTAACTTCAAAAAAATGTGTAGATTTAATTATTACGGATATGGCAGTAATGGAAGTAACGGA
GGGTGGACTTATTTTGCAAGAATTGATGAGCCCTTACACAGTGGAAGATATAAAGCAACATACAGAAGCAAATTTTAAAA
TTGGCTCTAACTTACTAGTAATTGAATGA

Upstream 100 bases:

>100_bases
TAGAAGCAGAGGAAATCGTTCCACTTGGAAGTTTAGATCCAGAAGAAATTGTTGTCCCAGGAGTATTTGTAAATTATATC
GTACCGTCGGAAGGAGTGAA

Downstream 100 bases:

>100_bases
GGGGAGATGTAATATATGGAGCAATTAAAAAAACAAATTTGTGATTATATTGAGAGTCAAGAAGAAGAGAGCGTAAAATT
TTTAAAACGATTAATTCAAG

Product: butyryl-CoA:acetate CoA transferase

Products: fatty acid anion; acetyl-CoA

Alternate protein names: Probable CoA-transferase subunit beta [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MEMGMGVEVRDKIARRAAKEIQNGMIVNLGIGIPSLVPNHLPDDINVMFHAENGIVGMGPTPSKGNEDENLCNAAGLPTS
LITGASYFDSCTAFGMIRKGLLDITILGSLQVSENGDLANWIVPGKRVPGIGGAMDLAQKAKRVVVVMNHVDKYGNAKIV
SECTLPLTSKKCVDLIITDMAVMEVTEGGLILQELMSPYTVEDIKQHTEANFKIGSNLLVIE

Sequences:

>Translated_222_residues
MEMGMGVEVRDKIARRAAKEIQNGMIVNLGIGIPSLVPNHLPDDINVMFHAENGIVGMGPTPSKGNEDENLCNAAGLPTS
LITGASYFDSCTAFGMIRKGLLDITILGSLQVSENGDLANWIVPGKRVPGIGGAMDLAQKAKRVVVVMNHVDKYGNAKIV
SECTLPLTSKKCVDLIITDMAVMEVTEGGLILQELMSPYTVEDIKQHTEANFKIGSNLLVIE
>Mature_222_residues
MEMGMGVEVRDKIARRAAKEIQNGMIVNLGIGIPSLVPNHLPDDINVMFHAENGIVGMGPTPSKGNEDENLCNAAGLPTS
LITGASYFDSCTAFGMIRKGLLDITILGSLQVSENGDLANWIVPGKRVPGIGGAMDLAQKAKRVVVVMNHVDKYGNAKIV
SECTLPLTSKKCVDLIITDMAVMEVTEGGLILQELMSPYTVEDIKQHTEANFKIGSNLLVIE

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=219, Percent_Identity=46.5753424657534, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI11545841, Length=213, Percent_Identity=47.4178403755869, Blast_Score=197, Evalue=5e-51,
Organism=Escherichia coli, GI1788552, Length=212, Percent_Identity=41.9811320754717, Blast_Score=197, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17531517, Length=211, Percent_Identity=52.60663507109, Blast_Score=211, Evalue=2e-55,
Organism=Drosophila melanogaster, GI21358325, Length=212, Percent_Identity=49.5283018867925, Blast_Score=206, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24655794, Length=212, Percent_Identity=49.5283018867925, Blast_Score=205, Evalue=1e-53,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: 2.8.3.8

Molecular weight: Translated: 23777; Mature: 23777

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGMGVEVRDKIARRAAKEIQNGMIVNLGIGIPSLVPNHLPDDINVMFHAENGIVGMGP
CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECCC
TPSKGNEDENLCNAAGLPTSLITGASYFDSCTAFGMIRKGLLDITILGSLQVSENGDLAN
CCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCEEE
WIVPGKRVPGIGGAMDLAQKAKRVVVVMNHVDKYGNAKIVSECTLPLTSKKCVDLIITDM
EECCCCCCCCCCHHHHHHHHHHEEEEEEEHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
AVMEVTEGGLILQELMSPYTVEDIKQHTEANFKIGSNLLVIE
HHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCEEECCEEEEEC
>Mature Secondary Structure
MEMGMGVEVRDKIARRAAKEIQNGMIVNLGIGIPSLVPNHLPDDINVMFHAENGIVGMGP
CCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCEEEEEECCCEEECCC
TPSKGNEDENLCNAAGLPTSLITGASYFDSCTAFGMIRKGLLDITILGSLQVSENGDLAN
CCCCCCCCHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCCEEE
WIVPGKRVPGIGGAMDLAQKAKRVVVVMNHVDKYGNAKIVSECTLPLTSKKCVDLIITDM
EECCCCCCCCCCHHHHHHHHHHEEEEEEEHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH
AVMEVTEGGLILQELMSPYTVEDIKQHTEANFKIGSNLLVIE
HHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acetate

Specific reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA

General reaction: Coenzyme A transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]