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The map label for this gene is yodS [H]

Identifier: 118477720

GI number: 118477720

Start: 2206364

End: 2207062

Strand: Direct

Name: yodS [H]

Synonym: BALH_2057

Alternate gene names: 118477720

Gene position: 2206364-2207062 (Clockwise)

Preceding gene: 118477719

Following gene: 118477721

Centisome position: 41.97

GC content: 39.06

Gene sequence:

>699_bases
ATGACAACTATTACGAATACATTCGATAAATTAAAAGAGATAGAGGAAGTAATTTCTTTATTCCACGATGATATGACATT
AATGTTTGGGGGATTTGGGGGGATCGGATCCCCTCCATCTTTAATACAGGCGATTTTAGAAAAAGGAGTTACAAATTTAA
ATTTAATTGGAAATGATACGGGATTTCCTGATGTAGGAATCGGTCGTCTCGTTACAAATGAAAGAGTAAAATCATTAATT
ACTTCTCATATCGGTTCAAATCCAAATGCAGGAAGACAGCTAAACGAAGGAAGGTTACAAATTGAATTTTCTCCTCAAGG
AACATTAGCAGAGCGTATTCGCGCTGGTGGTGTAGGACTTGGTGGCGTATTAGTTGATGTAGGTGTTGATACGATTGTAG
AAGAGGGAAAACGTACAGTTGAAATGAATGGCAAGACATATTTAGTTGAAACAGCATTAACTGCTGAGGTTGCGATTGTA
TATGCGAAAAAAGCGGATCCATTTGGTAACCTTGTGTTTGATAAGAGCGCTCGTAACATGAACCCTCACGTTGCTATGGC
CGGGGATATAACGATTGTAGAAGCAGAGGAAATCGTTCCACTTGGAAGTTTAGATCCAGAAGAAATTGTTGTCCCAGGAG
TATTTGTAAATTATATCGTACCGTCGGAAGGAGTGAATTGGAAATGGGTATGGGCGTAG

Upstream 100 bases:

>100_bases
CACCGCCAATGACAACTACATATTCCGAGTTAGATGAATTACTTTCAATTTTTGCAAAAAGTGTAGAAGAAATGATGCAA
AAAGGAGGGCATAGTATCGC

Downstream 100 bases:

>100_bases
AAGTGAGAGATAAAATTGCTAGACGTGCGGCGAAAGAAATACAGAATGGAATGATTGTAAATTTAGGTATTGGTATACCA
TCACTTGTACCCAATCATTT

Product: aetate CoA-transferase, subunit alpha

Products: fatty acid anion; acetyl-CoA

Alternate protein names: Probable CoA-transferase subunit alpha [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTTITNTFDKLKEIEEVISLFHDDMTLMFGGFGGIGSPPSLIQAILEKGVTNLNLIGNDTGFPDVGIGRLVTNERVKSLI
TSHIGSNPNAGRQLNEGRLQIEFSPQGTLAERIRAGGVGLGGVLVDVGVDTIVEEGKRTVEMNGKTYLVETALTAEVAIV
YAKKADPFGNLVFDKSARNMNPHVAMAGDITIVEAEEIVPLGSLDPEEIVVPGVFVNYIVPSEGVNWKWVWA

Sequences:

>Translated_232_residues
MTTITNTFDKLKEIEEVISLFHDDMTLMFGGFGGIGSPPSLIQAILEKGVTNLNLIGNDTGFPDVGIGRLVTNERVKSLI
TSHIGSNPNAGRQLNEGRLQIEFSPQGTLAERIRAGGVGLGGVLVDVGVDTIVEEGKRTVEMNGKTYLVETALTAEVAIV
YAKKADPFGNLVFDKSARNMNPHVAMAGDITIVEAEEIVPLGSLDPEEIVVPGVFVNYIVPSEGVNWKWVWA
>Mature_231_residues
TTITNTFDKLKEIEEVISLFHDDMTLMFGGFGGIGSPPSLIQAILEKGVTNLNLIGNDTGFPDVGIGRLVTNERVKSLIT
SHIGSNPNAGRQLNEGRLQIEFSPQGTLAERIRAGGVGLGGVLVDVGVDTIVEEGKRTVEMNGKTYLVETALTAEVAIVY
AKKADPFGNLVFDKSARNMNPHVAMAGDITIVEAEEIVPLGSLDPEEIVVPGVFVNYIVPSEGVNWKWVWA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=226, Percent_Identity=37.6106194690265, Blast_Score=162, Evalue=2e-40,
Organism=Homo sapiens, GI11545841, Length=226, Percent_Identity=37.6106194690265, Blast_Score=144, Evalue=9e-35,
Organism=Escherichia coli, GI1788551, Length=214, Percent_Identity=49.5327102803738, Blast_Score=225, Evalue=2e-60,
Organism=Escherichia coli, GI1787985, Length=234, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17531517, Length=234, Percent_Identity=35.4700854700855, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI21358325, Length=230, Percent_Identity=41.304347826087, Blast_Score=180, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24655794, Length=230, Percent_Identity=41.304347826087, Blast_Score=180, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: 2.8.3.8

Molecular weight: Translated: 24920; Mature: 24789

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTITNTFDKLKEIEEVISLFHDDMTLMFGGFGGIGSPPSLIQAILEKGVTNLNLIGNDT
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCC
GFPDVGIGRLVTNERVKSLITSHIGSNPNAGRQLNEGRLQIEFSPQGTLAERIRAGGVGL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCC
GGVLVDVGVDTIVEEGKRTVEMNGKTYLVETALTAEVAIVYAKKADPFGNLVFDKSARNM
CCEEEECCHHHHHHCCCEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCEEECCCCCCC
NPHVAMAGDITIVEAEEIVPLGSLDPEEIVVPGVFVNYIVPSEGVNWKWVWA
CCCEEEECCEEEEEHHHCCCCCCCCHHHEEECCEEEEEEECCCCCCEEEEEC
>Mature Secondary Structure 
TTITNTFDKLKEIEEVISLFHDDMTLMFGGFGGIGSPPSLIQAILEKGVTNLNLIGNDT
CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCC
GFPDVGIGRLVTNERVKSLITSHIGSNPNAGRQLNEGRLQIEFSPQGTLAERIRAGGVGL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCC
GGVLVDVGVDTIVEEGKRTVEMNGKTYLVETALTAEVAIVYAKKADPFGNLVFDKSARNM
CCEEEECCHHHHHHCCCEEEEECCCEEEEEEEEEEEEEEEEEECCCCCCCEEECCCCCCC
NPHVAMAGDITIVEAEEIVPLGSLDPEEIVVPGVFVNYIVPSEGVNWKWVWA
CCCEEEECCEEEEEHHHCCCCCCCCHHHEEECCEEEEEEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acyl-CoA; acetate

Specific reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA

General reaction: Coenzyme A transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]