Click here to switch to the map view.

The map label for this gene is sirB [H]

Identifier: 118477576

GI number: 118477576

Start: 2051642

End: 2052352

Strand: Reverse

Name: sirB [H]

Synonym: BALH_1904

Alternate gene names: 118477576

Gene position: 2052352-2051642 (Counterclockwise)

Preceding gene: 118477577

Following gene: 118477575

Centisome position: 39.04

GC content: 35.72

Gene sequence:

>711_bases
ATGAAAGGAATTGTATATGTTGGACACGGTAGTCGCTTGCAAGAGGGTAACGAACAATTCATTCACTTTATTCAATCTGT
TATGAAAGGACGTAACGAAAGAATTCAAAAAATAGCTTTTCTAGAACTAACGACACCTACCATTTCTGATGCAGTTACAG
AAACGATACTAGAGGGAGCAACTGAAATAATGATTGTACCTATTTTATTATTTGCAGCAGCTCACTATAAATGTGATATT
CCTTTTGAGATAGAAAAAATGCAAAAGCAATATCCACATATAACATTTTCAGTTGTACCACCTTTTAGTACGCATCCGCA
TATGGTTGAACTTGTAGTGAAAAGAATACGTGAAGCTATGCCAATGCAAAATAGTAGTATTTTACTCGTAGGAAGAGGTA
GTAGTGACCCCCAGCCGATACATGAGTTACAGCAAATTGGAGTAGCTGTCGAACAAAAACTCGGTATGCGAGTATGGTGT
TCCTTTTTAACGAAAGGAACGCCCTCTTTTACTGCTGAGCTCAAGACTATAACATCGACTGCATCTCATGTATATGTCAT
GCCGTACCTTCTCTTTACTGGATTATTGCTTCAAAAAATTAAGTTTCATACAAAAAAATACGATCACGTTACAACTTGTA
ACTGTCTTCAGTTTGATACATATATGAAATTAACATTACTAGAACGAATGGAGGAATATGTGTATGTATAA

Upstream 100 bases:

>100_bases
ATACCGACGTTCCAACTTTACGCTATGCAAATAAAGTCGGGTTTCATAACATTGATCATCAATTACAAGAAACTCTTATG
CAGAAAGACATGGTAAGACA

Downstream 100 bases:

>100_bases
CATGTACCCTCTTATGTTTAATCTACATAATAAAGTGGTCGTTATCATTGGTGGAGGTAAAATCGCATATCGAAAAGCGT
CTGGATTAAAAGATACAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKGRNERIQKIAFLELTTPTISDAVTETILEGATEIMIVPILLFAAAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVWC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKFHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV

Sequences:

>Translated_236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKGRNERIQKIAFLELTTPTISDAVTETILEGATEIMIVPILLFAAAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVWC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKFHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
>Mature_236_residues
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKGRNERIQKIAFLELTTPTISDAVTETILEGATEIMIVPILLFAAAHYKCDI
PFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAMPMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVWC
SFLTKGTPSFTAELKTITSTASHVYVMPYLLFTGLLLQKIKFHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 26969; Mature: 26969

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKGRNERIQKIAFLELTTPTISDAVTETILEGA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEEECCCHHHHHHHHHHHHCC
TEIMIVPILLFAAAHYKCDIPFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
PMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVWCSFLTKGTPSFTAELKTITST
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ASHVYVMPYLLFTGLLLQKIKFHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGIVYVGHGSRLQEGNEQFIHFIQSVMKGRNERIQKIAFLELTTPTISDAVTETILEGA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHEEEECCCHHHHHHHHHHHHCC
TEIMIVPILLFAAAHYKCDIPFEIEKMQKQYPHITFSVVPPFSTHPHMVELVVKRIREAM
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
PMQNSSILLVGRGSSDPQPIHELQQIGVAVEQKLGMRVWCSFLTKGTPSFTAELKTITST
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ASHVYVMPYLLFTGLLLQKIKFHTKKYDHVTTCNCLQFDTYMKLTLLERMEEYVYV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA