Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yeaD [H]
Identifier: 118477558
GI number: 118477558
Start: 2032832
End: 2034046
Strand: Reverse
Name: yeaD [H]
Synonym: BALH_1883
Alternate gene names: 118477558
Gene position: 2034046-2032832 (Counterclockwise)
Preceding gene: 118477559
Following gene: 118477557
Centisome position: 38.69
GC content: 36.05
Gene sequence:
>1215_bases ATGAAACGCACGCTACGAGCACTATATCACGTTACGAAGTTATTACTAATCCCTTTATGCCTAGTGTTAACATTTGTGTA TGCTATGCTTCAAGGAGGATTTGTAAGTTGGTTTTTATTTTACAGTATGGTTCCTATTGGTCTTTATTCACTTTTACTCC CCTTCTACGCTTTACGGGGTGCTGAAGTAAAAAGAATAACAAATCAAAACGATTATGTAGCAGGAGAACCTTTTTTAAGC ACGATTACAATAAAAAGAAAATTTCCTTTCCCCTTACTTTATTTAGTTATAGAAGATGAACTGCCACCACACTTTACAAG TTGTAGACAAACAAAGATGCATAAAACAATACTCTTTCCAGGATTAAAACGAAATATTTCGTTTCAATATGCAATTGACA CAATCCCTAGAGGAGAGCACACTTTTTCAAGCGTACGAGTCAAAACTGGTGATCTATTCAGTATGATGGAAAAAGAAGTA ACTTTTTCAGTTCCGGATACATTTTTAGTCTATCCTCAGTATGTAGATATAACGTATCAGCAATTGGAAAACCATTTCGA ACAAGGAGCGCTCTCAGCAAATATAAATTTCACAAAAGACTCTACCATTTCTGTCGGTGTGAGAGACTATAAACCTGGTG ACCGCTTTTCATGGATTGATTGGAAAGCAACTGCAAGAACAAACAACATTATGACGAAAGAGTTTGAACAACAGCGTAGC CATAATATTATGATATTCATAGACAGAACTGAGTCCCCTCTATTCGAATCAGTCGTCACATTTACTGCCTCTATTGTCAG GGCTGTATTGAAGCAAAATTCACCAGCGTCATTTGTGTCTGTCGGAAAAGAACGAACTTTTTTCCCTTTAGACAATGGAG ATAGTCAGTTGCAGCAAATCTTTTGTCATTTAGCAAAAGTACAAGCGGACAGTGTATTCCCGCTCTCCCAGAGTGTAGAA ATGGAATTAAGAAAAGTTTATGAGCCCGTAACAATTATACTCGTGACAAGCGATCTTTCTCCCGATATTCAAAAGGCGGC TGACTATGCCGCTATACAAAATAGAAAATTACTAGTTTTTATTGTAAAAGAAAAACCGAATCAACTCTCACATCGAGAAC TAAGTATTTTAGAAACTCTACAAAAACGAAAAATATTTGTAAATGTGGTTTATGAAAACCGATATACAAATGTGTTTTTT GAGGTGAGCAAATGA
Upstream 100 bases:
>100_bases TAAAAATGGAAGCAAAATTTGAGGGAATAACAGGGGAACAAGTTATTTCAAAAATCGTTGCACGAACTACCGTGCCGACT CAAAGGAAGATGAACCTTTA
Downstream 100 bases:
>100_bases CAACATTACAAACAAAATACAAATGGGATATGAGCAGATTCTTCATGCATGCATGCGCATTTCTACTTTTACTAGAATGG ATACGACCCCTTATAGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGEPFLS TITIKRKFPFPLLYLVIEDELPPHFTSCRQTKMHKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV TFSVPDTFLVYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGVRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE MELRKVYEPVTIILVTSDLSPDIQKAADYAAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYENRYTNVFF EVSK
Sequences:
>Translated_404_residues MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGEPFLS TITIKRKFPFPLLYLVIEDELPPHFTSCRQTKMHKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV TFSVPDTFLVYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGVRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE MELRKVYEPVTIILVTSDLSPDIQKAADYAAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYENRYTNVFF EVSK >Mature_404_residues MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRGAEVKRITNQNDYVAGEPFLS TITIKRKFPFPLLYLVIEDELPPHFTSCRQTKMHKTILFPGLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEV TFSVPDTFLVYPQYVDITYQQLENHFEQGALSANINFTKDSTISVGVRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQIFCHLAKVQADSVFPLSQSVE MELRKVYEPVTIILVTSDLSPDIQKAADYAAIQNRKLLVFIVKEKPNQLSHRELSILETLQKRKIFVNVVYENRYTNVFF EVSK
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 46650; Mature: 46650
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AEVKRITNQNDYVAGEPFLSTITIKRKFPFPLLYLVIEDELPPHFTSCRQTKMHKTILFP CHHEEECCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHEECC GLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEVTFSVPDTFLVYPQYVDITYQ CCCCCCEEEEEEECCCCCCCCHHEEEEECCHHHHHHHHHEEEECCCEEEECCCHHHHHHH QLENHFEQGALSANINFTKDSTISVGVRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS HHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHC HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHH FCHLAKVQADSVFPLSQSVEMELRKVYEPVTIILVTSDLSPDIQKAADYAAIQNRKLLVF HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEE IVKEKPNQLSHRELSILETLQKRKIFVNVVYENRYTNVFFEVSK EEECCCCCCCHHHHHHHHHHHHCEEEEEEEEECCEEEEEEEECC >Mature Secondary Structure MKRTLRALYHVTKLLLIPLCLVLTFVYAMLQGGFVSWFLFYSMVPIGLYSLLLPFYALRG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC AEVKRITNQNDYVAGEPFLSTITIKRKFPFPLLYLVIEDELPPHFTSCRQTKMHKTILFP CHHEEECCCCCEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHEECC GLKRNISFQYAIDTIPRGEHTFSSVRVKTGDLFSMMEKEVTFSVPDTFLVYPQYVDITYQ CCCCCCEEEEEEECCCCCCCCHHEEEEECCHHHHHHHHHEEEECCCEEEECCCHHHHHHH QLENHFEQGALSANINFTKDSTISVGVRDYKPGDRFSWIDWKATARTNNIMTKEFEQQRS HHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHC HNIMIFIDRTESPLFESVVTFTASIVRAVLKQNSPASFVSVGKERTFFPLDNGDSQLQQI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCHHHHHHH FCHLAKVQADSVFPLSQSVEMELRKVYEPVTIILVTSDLSPDIQKAADYAAIQNRKLLVF HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEE IVKEKPNQLSHRELSILETLQKRKIFVNVVYENRYTNVFFEVSK EEECCCCCCCHHHHHHHHHHHHCEEEEEEEEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]