Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yfmI [H]
Identifier: 118477507
GI number: 118477507
Start: 1984613
End: 1985842
Strand: Reverse
Name: yfmI [H]
Synonym: BALH_1832
Alternate gene names: 118477507
Gene position: 1985842-1984613 (Counterclockwise)
Preceding gene: 118477524
Following gene: 118477497
Centisome position: 37.77
GC content: 34.8
Gene sequence:
>1230_bases GTGGTGTGCTTATTGCAACAACGTTCATTAACTTACTATTTAGGATCGAAAATATGCATTACTCTCGCTGACATCGTATA CATAATGATTATTACAACTCATATGTATATCACAACTAAATCCGCTACATTAACTGCTCTTTTTCCATTATTACAAGTCA TAACTAACCTTATAGCAAATACATCTGCACCACTTATAATGAATCGCTTTTCATCTTATTCATTACTGTTTACACTACAA TGGTCAAAAACTGCCCTACTAATTTTGTTAATGCTATTATTTCCGGTCCTTTCCACAAACATTGTAACACTATTCATTTT CATTTTTTTCATTTCATTATGTAGTGGCTGGAGCGCTCCATTACTATACGGTATTCTACCGCGCCTTACACCAAAAGAAA ATTTAGTAAAAGTAAATAGTATTTTTTCCTTTTCCACACAAATTGCCCAAACCGCTGCTTATTCATTTACAAGTGTTATC GTTCTTCTTATCGGCGCTACTTCTACACTCGTGCTGAATAACATTTTGATGATTTTCGGATGTGTTGCACTACACTTTTC ATTACGTTCCATACATAGTGAACGAGTAATAGAGCCTTCTTCTTCAAAAGCTGCTGCTTTATTGGAAAGTTGGAAACTCT TATTTCAAAATCCTGCTCTCCGTACCGTTACATGTATGGACTTAATTGAAACTTTCGCAGGGACGATATGGATTGGCGCT ATTACGATGGCTTATGTAACAACCGTCCTTCATAAAGGAGAAGAATGGTGGGGATATATTAATACAAGTTATTACGTTGG CACGTTAATTGGCGGGCTATTAGCGTGGAAAATGAGTACATACATTCAAAACAATTTAATACGCTCTATGGCGATAGGCT CTCTTATGTTTAGTATTCTTACATTTTTATACGGTATGACAAGTAGCGGCTTTATTGCGCTATTCCTATGTGTTCTAATG GGGCCATGTTATCAAATTAGAGATATTTCTCAAACGACAGTGTTACAATCTAGTGTCGAGCCTACTCTATTATCCAAAAT GTATACAGCTCATGGTGCACTCCTCTCGACGGCTTCTGGTATTTCTATGCTTAGTGTTGGCATTATTACTGATATGTTTG GTGTTCGTACAATTTATATCATTTCTGCTTTTCTTATTTTATGTTCTGCTTGTTTATCTTTTAGTCTATTAAAATATCAT AAAACAAATCAAAAAAATATTTCAATGTAA
Upstream 100 bases:
>100_bases GAAAATCCCTTTCAAAAAGTGACAAAAAATTAAATTCTTTCAAAAATTTAATTTCCAAATTATAATTATTCTAACTACTG AAATATTACTTTTTGGGAAG
Downstream 100 bases:
>100_bases TCAATAAAGCAAAAAGGACAGGAACTCCTGTCCTTTTTTATATATTCTATTTATGACAATCCCGGAATTTTTCTATGCTT TGTCGCTTGTTCAAAAGCGT
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MVCLLQQRSLTYYLGSKICITLADIVYIMIITTHMYITTKSATLTALFPLLQVITNLIANTSAPLIMNRFSSYSLLFTLQ WSKTALLILLMLLFPVLSTNIVTLFIFIFFISLCSGWSAPLLYGILPRLTPKENLVKVNSIFSFSTQIAQTAAYSFTSVI VLLIGATSTLVLNNILMIFGCVALHFSLRSIHSERVIEPSSSKAAALLESWKLLFQNPALRTVTCMDLIETFAGTIWIGA ITMAYVTTVLHKGEEWWGYINTSYYVGTLIGGLLAWKMSTYIQNNLIRSMAIGSLMFSILTFLYGMTSSGFIALFLCVLM GPCYQIRDISQTTVLQSSVEPTLLSKMYTAHGALLSTASGISMLSVGIITDMFGVRTIYIISAFLILCSACLSFSLLKYH KTNQKNISM
Sequences:
>Translated_409_residues MVCLLQQRSLTYYLGSKICITLADIVYIMIITTHMYITTKSATLTALFPLLQVITNLIANTSAPLIMNRFSSYSLLFTLQ WSKTALLILLMLLFPVLSTNIVTLFIFIFFISLCSGWSAPLLYGILPRLTPKENLVKVNSIFSFSTQIAQTAAYSFTSVI VLLIGATSTLVLNNILMIFGCVALHFSLRSIHSERVIEPSSSKAAALLESWKLLFQNPALRTVTCMDLIETFAGTIWIGA ITMAYVTTVLHKGEEWWGYINTSYYVGTLIGGLLAWKMSTYIQNNLIRSMAIGSLMFSILTFLYGMTSSGFIALFLCVLM GPCYQIRDISQTTVLQSSVEPTLLSKMYTAHGALLSTASGISMLSVGIITDMFGVRTIYIISAFLILCSACLSFSLLKYH KTNQKNISM >Mature_409_residues MVCLLQQRSLTYYLGSKICITLADIVYIMIITTHMYITTKSATLTALFPLLQVITNLIANTSAPLIMNRFSSYSLLFTLQ WSKTALLILLMLLFPVLSTNIVTLFIFIFFISLCSGWSAPLLYGILPRLTPKENLVKVNSIFSFSTQIAQTAAYSFTSVI VLLIGATSTLVLNNILMIFGCVALHFSLRSIHSERVIEPSSSKAAALLESWKLLFQNPALRTVTCMDLIETFAGTIWIGA ITMAYVTTVLHKGEEWWGYINTSYYVGTLIGGLLAWKMSTYIQNNLIRSMAIGSLMFSILTFLYGMTSSGFIALFLCVLM GPCYQIRDISQTTVLQSSVEPTLLSKMYTAHGALLSTASGISMLSVGIITDMFGVRTIYIISAFLILCSACLSFSLLKYH KTNQKNISM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45313; Mature: 45313
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCLLQQRSLTYYLGSKICITLADIVYIMIITTHMYITTKSATLTALFPLLQVITNLIAN CEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCC TSAPLIMNRFSSYSLLFTLQWSKTALLILLMLLFPVLSTNIVTLFIFIFFISLCSGWSAP CCCCHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLYGILPRLTPKENLVKVNSIFSFSTQIAQTAAYSFTSVIVLLIGATSTLVLNNILMIFG HHHHHHCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH CVALHFSLRSIHSERVIEPSSSKAAALLESWKLLFQNPALRTVTCMDLIETFAGTIWIGA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ITMAYVTTVLHKGEEWWGYINTSYYVGTLIGGLLAWKMSTYIQNNLIRSMAIGSLMFSIL HHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFLYGMTSSGFIALFLCVLMGPCYQIRDISQTTVLQSSVEPTLLSKMYTAHGALLSTASG HHHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC ISMLSVGIITDMFGVRTIYIISAFLILCSACLSFSLLKYHKTNQKNISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVCLLQQRSLTYYLGSKICITLADIVYIMIITTHMYITTKSATLTALFPLLQVITNLIAN CEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHCC TSAPLIMNRFSSYSLLFTLQWSKTALLILLMLLFPVLSTNIVTLFIFIFFISLCSGWSAP CCCCHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLYGILPRLTPKENLVKVNSIFSFSTQIAQTAAYSFTSVIVLLIGATSTLVLNNILMIFG HHHHHHCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH CVALHFSLRSIHSERVIEPSSSKAAALLESWKLLFQNPALRTVTCMDLIETFAGTIWIGA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ITMAYVTTVLHKGEEWWGYINTSYYVGTLIGGLLAWKMSTYIQNNLIRSMAIGSLMFSIL HHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFLYGMTSSGFIALFLCVLMGPCYQIRDISQTTVLQSSVEPTLLSKMYTAHGALLSTASG HHHHCCCCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC ISMLSVGIITDMFGVRTIYIISAFLILCSACLSFSLLKYHKTNQKNISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]