Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ykvI [H]
Identifier: 118477460
GI number: 118477460
Start: 1939801
End: 1940841
Strand: Reverse
Name: ykvI [H]
Synonym: BALH_1782
Alternate gene names: 118477460
Gene position: 1940841-1939801 (Counterclockwise)
Preceding gene: 118477464
Following gene: 118477455
Centisome position: 36.92
GC content: 35.54
Gene sequence:
>1041_bases ATGGACAATCAACAATGGCAAGTAGCAAAGAAAGTCGCTGCTACTTATATTGGAACAGTCGTTGGAGCTGGATTTGCTAC TGGACGAGAAATTGTTGAATTTTTTACAGTGAATGGCTTTTATGGAACAATTGGCATATGTATAAGTGGATTTTTTTTTA TTTGGCTCGGTACAAAAATGATGTTACTCTCCTCACAAATCGGTGCATTTTCAGCGCAAGAATTTAACAAATATTTATTT GGGGATGTATTTGGAAATGTCGTAAACACATTATTATTGCTCGTATTATTTGGTGTAACGAGCGTTATGTTATCAGGAGC TGGGGCGGTATTCGAAGAGCAACTTCGTTTACCAAGACAACTCGGTATTTTCATTACAGTAATTGCATGCCTCATTATAG GTAGTCGCGGATTACAAGGAGTTTTTGAAGTTAATACACTTGTCGTACCTATTATGATGATTTTTATTATCGGACTTGCT ATTACTACCTTTTTTCACGGTACAACCCCTATTAGTAACACTATTCCTGCAGAAAGCTGGAATATGAAGTGGATAACTAG TCCTATTACATATGTCGCCTTAAATCTTTCTCTCGCCCAAAGCGTTCTCGTCCCGTTAGCCAGCGAAGTAAAAGATCGAA AAGCCATTTTATGGGGCGGTATTTTAGGTGGTGCAGGACTTTCTTTAATTTTATTATGTAGCCATTTAGCGATCTTATCA GTCGACCAATTTTATCAATATAATATCCCAATGGCTGAAGTCATAAGAAAATTCAATGCAACTTTTCACTTTTTCTTTGT TCTTATCATTTTCGGTGAAGTGTTCACAACTTTAGTTGGCAATGTGTTTGGAATGACAAAACAAATGCAATCCATCACCG GTTGGAAAAATAACAATATTATTTTCTTCATCTTACTAATAAGTTATTGCTTTAGTTACGTTGGTTACAGTGAATTACTC CATATTCTATATCCAGTAATCGGGTGGGTTAGCATCATTTTACTTCCGATTATTGCTTTTAAACAACTTCAAAAAACATA A
Upstream 100 bases:
>100_bases AATTCATGTATGTTTTCAAACACTTCATACGTCTAATTGTCCAAGCTCATACATATGCATAATAGTAAATCAAGCTCATC GTAGTAGAAAGAGGGATAAC
Downstream 100 bases:
>100_bases AAAGCATCCATGTTATTGGATGCTTTTTATATATTCATTCACAATCATCACATACTTCCCAGTACGGCCCCATTTCGAGT GCCAAATATGGCTTTAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDNQQWQVAKKVAATYIGTVVGAGFATGREIVEFFTVNGFYGTIGICISGFFFIWLGTKMMLLSSQIGAFSAQEFNKYLF GDVFGNVVNTLLLLVLFGVTSVMLSGAGAVFEEQLRLPRQLGIFITVIACLIIGSRGLQGVFEVNTLVVPIMMIFIIGLA ITTFFHGTTPISNTIPAESWNMKWITSPITYVALNLSLAQSVLVPLASEVKDRKAILWGGILGGAGLSLILLCSHLAILS VDQFYQYNIPMAEVIRKFNATFHFFFVLIIFGEVFTTLVGNVFGMTKQMQSITGWKNNNIIFFILLISYCFSYVGYSELL HILYPVIGWVSIILLPIIAFKQLQKT
Sequences:
>Translated_346_residues MDNQQWQVAKKVAATYIGTVVGAGFATGREIVEFFTVNGFYGTIGICISGFFFIWLGTKMMLLSSQIGAFSAQEFNKYLF GDVFGNVVNTLLLLVLFGVTSVMLSGAGAVFEEQLRLPRQLGIFITVIACLIIGSRGLQGVFEVNTLVVPIMMIFIIGLA ITTFFHGTTPISNTIPAESWNMKWITSPITYVALNLSLAQSVLVPLASEVKDRKAILWGGILGGAGLSLILLCSHLAILS VDQFYQYNIPMAEVIRKFNATFHFFFVLIIFGEVFTTLVGNVFGMTKQMQSITGWKNNNIIFFILLISYCFSYVGYSELL HILYPVIGWVSIILLPIIAFKQLQKT >Mature_346_residues MDNQQWQVAKKVAATYIGTVVGAGFATGREIVEFFTVNGFYGTIGICISGFFFIWLGTKMMLLSSQIGAFSAQEFNKYLF GDVFGNVVNTLLLLVLFGVTSVMLSGAGAVFEEQLRLPRQLGIFITVIACLIIGSRGLQGVFEVNTLVVPIMMIFIIGLA ITTFFHGTTPISNTIPAESWNMKWITSPITYVALNLSLAQSVLVPLASEVKDRKAILWGGILGGAGLSLILLCSHLAILS VDQFYQYNIPMAEVIRKFNATFHFFFVLIIFGEVFTTLVGNVFGMTKQMQSITGWKNNNIIFFILLISYCFSYVGYSELL HILYPVIGWVSIILLPIIAFKQLQKT
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38251; Mature: 38251
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNQQWQVAKKVAATYIGTVVGAGFATGREIVEFFTVNGFYGTIGICISGFFFIWLGTKM CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MLLSSQIGAFSAQEFNKYLFGDVFGNVVNTLLLLVLFGVTSVMLSGAGAVFEEQLRLPRQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH LGIFITVIACLIIGSRGLQGVFEVNTLVVPIMMIFIIGLAITTFFHGTTPISNTIPAESW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NMKWITSPITYVALNLSLAQSVLVPLASEVKDRKAILWGGILGGAGLSLILLCSHLAILS CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDQFYQYNIPMAEVIRKFNATFHFFFVLIIFGEVFTTLVGNVFGMTKQMQSITGWKNNNI HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IFFILLISYCFSYVGYSELLHILYPVIGWVSIILLPIIAFKQLQKT EHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNQQWQVAKKVAATYIGTVVGAGFATGREIVEFFTVNGFYGTIGICISGFFFIWLGTKM CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MLLSSQIGAFSAQEFNKYLFGDVFGNVVNTLLLLVLFGVTSVMLSGAGAVFEEQLRLPRQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH LGIFITVIACLIIGSRGLQGVFEVNTLVVPIMMIFIIGLAITTFFHGTTPISNTIPAESW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC NMKWITSPITYVALNLSLAQSVLVPLASEVKDRKAILWGGILGGAGLSLILLCSHLAILS CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDQFYQYNIPMAEVIRKFNATFHFFFVLIIFGEVFTTLVGNVFGMTKQMQSITGWKNNNI HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IFFILLISYCFSYVGYSELLHILYPVIGWVSIILLPIIAFKQLQKT EHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]