Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yqhO [H]
Identifier: 118477443
GI number: 118477443
Start: 1922128
End: 1923096
Strand: Reverse
Name: yqhO [H]
Synonym: BALH_1763
Alternate gene names: 118477443
Gene position: 1923096-1922128 (Counterclockwise)
Preceding gene: 118477447
Following gene: 118477441
Centisome position: 36.58
GC content: 36.22
Gene sequence:
>969_bases TTGATGAAAATTGATGGTGTTTTTGAAGGAGGCGGTGTACGCGGAATTGCGCATGTAGGGGCAATTTGTGCGTTAGCTGA AAAAGGCTATGAATGGGAACGTGTAGCTGGAACATCAGCTGGTTCAATCATCGCTGCGCTCCTAGCAGCAGGATACTCTT GCTCAGAGCTAAAAACGATTATAACAAATATTGATTATGATAAATTTACGAAGAGAACCTTTATTGACAGAATCCCGTTT ATTGGAAAAGGATTAAGCGCATGGACTACTCTTGGTATTTACTCTAATATTTTTATCGAAGAATGGATTGAAGAATTACT TCGAAAAAAAGGAGTTCACTTATTTACAGATTTACCTGATTTAAATAAGCTTAAAATTATCGCTTCTGATATAAGTAATG GTAAAATGGTTATCTTTCCTGATGACTTACCGAACTACGGATTTTTAAATTATCGCTTCTCTATTGCGAAGGCTGTAAGA ATGAGTAGTACAATCCCCTTCTTTTTTGAGCCGGTAAAATGGCGAACCCCAAAATGGAAACAACCTTGTTATATGGTTGA TGGAGGGATTTTAAGCAATTATCCAATTTGGATTTTCGATTCACCTACCTCTCCTCGCTGGCCAACTTTTGGATTTCATT TCGTAAAAGATGATATCCAAGCTGACCCTGCTCACTATAACGAGCCTATCTCCATGTTCAAAGGACTATTCAAAACAATG ATGCAAGCCCATGATTTACGTCATTTAGACAAAGAATCAAAAGCAAGAACAATTACAATTCCAACTGGGGCCATTACTAG TACAAACTTTGAGTTAACAATAGAAGAAAAAGAGTGGCTATACAATTCTGGTTATAACGCCGCAAATAAGTTTTTACAAT CATGGAATTTCAGACAATATATTAATGAATATAGAAACGGAAATCATAATCGAAAAACAAATCGGTATTTCCGTCAACTT GACTCATAA
Upstream 100 bases:
>100_bases CTTTGTAGGCTGCTAGTAAATTTAAAAACTATTGTAAAAAAGCACGTACAATACGTGCTTTTTTGCCATTTTCAAATTTT TTATGTGAAAGGAAGTAGAA
Downstream 100 bases:
>100_bases TACTATTATTTTTCATATGAGCACACGTAACGCTTTCAAAAAAATAAGCCTAGTAATATATAATATTACTAGGCTTATTT ACTTCCTGTATAATTTATTA
Product: phospholipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MMKIDGVFEGGGVRGIAHVGAICALAEKGYEWERVAGTSAGSIIAALLAAGYSCSELKTIITNIDYDKFTKRTFIDRIPF IGKGLSAWTTLGIYSNIFIEEWIEELLRKKGVHLFTDLPDLNKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVR MSSTIPFFFEPVKWRTPKWKQPCYMVDGGILSNYPIWIFDSPTSPRWPTFGFHFVKDDIQADPAHYNEPISMFKGLFKTM MQAHDLRHLDKESKARTITIPTGAITSTNFELTIEEKEWLYNSGYNAANKFLQSWNFRQYINEYRNGNHNRKTNRYFRQL DS
Sequences:
>Translated_322_residues MMKIDGVFEGGGVRGIAHVGAICALAEKGYEWERVAGTSAGSIIAALLAAGYSCSELKTIITNIDYDKFTKRTFIDRIPF IGKGLSAWTTLGIYSNIFIEEWIEELLRKKGVHLFTDLPDLNKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVR MSSTIPFFFEPVKWRTPKWKQPCYMVDGGILSNYPIWIFDSPTSPRWPTFGFHFVKDDIQADPAHYNEPISMFKGLFKTM MQAHDLRHLDKESKARTITIPTGAITSTNFELTIEEKEWLYNSGYNAANKFLQSWNFRQYINEYRNGNHNRKTNRYFRQL DS >Mature_322_residues MMKIDGVFEGGGVRGIAHVGAICALAEKGYEWERVAGTSAGSIIAALLAAGYSCSELKTIITNIDYDKFTKRTFIDRIPF IGKGLSAWTTLGIYSNIFIEEWIEELLRKKGVHLFTDLPDLNKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVR MSSTIPFFFEPVKWRTPKWKQPCYMVDGGILSNYPIWIFDSPTSPRWPTFGFHFVKDDIQADPAHYNEPISMFKGLFKTM MQAHDLRHLDKESKARTITIPTGAITSTNFELTIEEKEWLYNSGYNAANKFLQSWNFRQYINEYRNGNHNRKTNRYFRQL DS
Specific function: Probable lipid hydrolase [H]
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 patatin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016035 - InterPro: IPR002641 [H]
Pfam domain/function: PF01734 Patatin [H]
EC number: NA
Molecular weight: Translated: 36971; Mature: 36971
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKIDGVFEGGGVRGIAHVGAICALAEKGYEWERVAGTSAGSIIAALLAAGYSCSELKTI CCEECCEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH ITNIDYDKFTKRTFIDRIPFIGKGLSAWTTLGIYSNIFIEEWIEELLRKKGVHLFTDLPD HHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC LNKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVRMSSTIPFFFEPVKWRTPKWK CCCEEEEEECCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCCCCCCC QPCYMVDGGILSNYPIWIFDSPTSPRWPTFGFHFVKDDIQADPAHYNEPISMFKGLFKTM CCEEEECCCEECCCCEEEEECCCCCCCCCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHH MQAHDLRHLDKESKARTITIPTGAITSTNFELTIEEKEWLYNSGYNAANKFLQSWNFRQY HHHHHHHHHCCCCCCEEEEECCCCEECCCEEEEECHHHHHHCCCCHHHHHHHHCCCHHHH INEYRNGNHNRKTNRYFRQLDS HHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MMKIDGVFEGGGVRGIAHVGAICALAEKGYEWERVAGTSAGSIIAALLAAGYSCSELKTI CCEECCEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCHHHHHHH ITNIDYDKFTKRTFIDRIPFIGKGLSAWTTLGIYSNIFIEEWIEELLRKKGVHLFTDLPD HHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC LNKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVRMSSTIPFFFEPVKWRTPKWK CCCEEEEEECCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCCEECCCCCCCCCCC QPCYMVDGGILSNYPIWIFDSPTSPRWPTFGFHFVKDDIQADPAHYNEPISMFKGLFKTM CCEEEECCCEECCCCEEEEECCCCCCCCCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHH MQAHDLRHLDKESKARTITIPTGAITSTNFELTIEEKEWLYNSGYNAANKFLQSWNFRQY HHHHHHHHHCCCCCCEEEEECCCCEECCCEEEEECHHHHHHCCCCHHHHHHHHCCCHHHH INEYRNGNHNRKTNRYFRQLDS HHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]