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The map label for this gene is pdaA [H]

Identifier: 118477418

GI number: 118477418

Start: 1893036

End: 1893863

Strand: Direct

Name: pdaA [H]

Synonym: BALH_1738

Alternate gene names: 118477418

Gene position: 1893036-1893863 (Clockwise)

Preceding gene: 118477417

Following gene: 118477420

Centisome position: 36.01

GC content: 37.2

Gene sequence:

>828_bases
ATGTATTATTTTTATTCACCAGAAGGGTTTGCTCCATATCAATGGGGGCTAGAACGAGATGTTTCGTATGCCTATATGCC
ATATAACTTATTTTATTACGGAGATTATATAAGAACATTGCCATACACATATACCCCTCAAAGCTATGAAGTACAAATGA
AAGCAGATGAACGTGGATCGTGGACACCATTTTCTTGGGTCGAAAAATATGCGTACGCATTTTCAGGACCGTACAATAAA
GCGGAAGTCGCACTTACATTTGATGACGGGCCGGATTTAGAATTTACGCCAAAAATATTAGATAAGTTAAAACAACATAA
TGTAAAAGCTACTTTTTTCTTACTTGGTGAAAACGCAGAAAAGTTTCCGAATGTCGTAAAGCGTATTGCGAATGAAGGGC
ATGTAATTGGCAATCATACGTATAGTCATCCAAATTTAGCGAAAGTAAATGATGCTGAGTACCGTAATCAAATTATAAAA
ACAGAAGAAATATTAAATCGTTTAGCTGGGTATGCACCGAAATTTATTCGTCCTCCATATGGTGAAATACTTGAAGATCA
ATTGAAGTGGGCAACTGAGAAAAATTTTATGATTGTACAGTGGAGTGTTGATACAGTTGATTGGAAAGGCGTAAGCGCTG
AAACAATTACAAATAATGTGTTAGGGAATTCGTTTCCTGGAAGTGTCATCCTTCAGCATTCAACACCAGGTGGGCATTTA
CAAGGATCTGTAGATGCATTAGACAAAATCATTCCGCAGTTAAAAACGAAAGGGGCACGGTTTGTAACGCTTCCAAGCAT
GTTCCAGACATCAAAAGAACGAAAATGA

Upstream 100 bases:

>100_bases
ACTGTCCTAATTACGGACAGTCTTATTTTTGTTTATGAATAACAATTTCTCTAACAAAGTGTAGATGAATCACATATGAA
ACTTTAGGGAGGTTTTTATT

Downstream 100 bases:

>100_bases
ATGTGTTATAAATTGGGGAAAATATGATTGTGTCGAATAATGAAGGTGTACGTTACGAGGGGATATAATTGATGTATGCA
CTAATAAACATAGGAATGAG

Product: polysaccharide deacetylase

Products: chitosan; acetate

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYYFYSPEGFAPYQWGLERDVSYAYMPYNLFYYGDYIRTLPYTYTPQSYEVQMKADERGSWTPFSWVEKYAYAFSGPYNK
AEVALTFDDGPDLEFTPKILDKLKQHNVKATFFLLGENAEKFPNVVKRIANEGHVIGNHTYSHPNLAKVNDAEYRNQIIK
TEEILNRLAGYAPKFIRPPYGEILEDQLKWATEKNFMIVQWSVDTVDWKGVSAETITNNVLGNSFPGSVILQHSTPGGHL
QGSVDALDKIIPQLKTKGARFVTLPSMFQTSKERK

Sequences:

>Translated_275_residues
MYYFYSPEGFAPYQWGLERDVSYAYMPYNLFYYGDYIRTLPYTYTPQSYEVQMKADERGSWTPFSWVEKYAYAFSGPYNK
AEVALTFDDGPDLEFTPKILDKLKQHNVKATFFLLGENAEKFPNVVKRIANEGHVIGNHTYSHPNLAKVNDAEYRNQIIK
TEEILNRLAGYAPKFIRPPYGEILEDQLKWATEKNFMIVQWSVDTVDWKGVSAETITNNVLGNSFPGSVILQHSTPGGHL
QGSVDALDKIIPQLKTKGARFVTLPSMFQTSKERK
>Mature_275_residues
MYYFYSPEGFAPYQWGLERDVSYAYMPYNLFYYGDYIRTLPYTYTPQSYEVQMKADERGSWTPFSWVEKYAYAFSGPYNK
AEVALTFDDGPDLEFTPKILDKLKQHNVKATFFLLGENAEKFPNVVKRIANEGHVIGNHTYSHPNLAKVNDAEYRNQIIK
TEEILNRLAGYAPKFIRPPYGEILEDQLKWATEKNFMIVQWSVDTVDWKGVSAETITNNVLGNSFPGSVILQHSTPGGHL
QGSVDALDKIIPQLKTKGARFVTLPSMFQTSKERK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=166, Percent_Identity=35.5421686746988, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6323338, Length=135, Percent_Identity=37.7777777777778, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: 3.5.1.41

Molecular weight: Translated: 31608; Mature: 31608

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYFYSPEGFAPYQWGLERDVSYAYMPYNLFYYGDYIRTLPYTYTPQSYEVQMKADERGS
CEEEECCCCCCCHHCCCCCCCEEEEECEEEEEECCCHHHCCCEECCCCEEEEEEECCCCC
WTPFSWVEKYAYAFSGPYNKAEVALTFDDGPDLEFTPKILDKLKQHNVKATFFLLGENAE
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCEEEEEEECCCHH
KFPNVVKRIANEGHVIGNHTYSHPNLAKVNDAEYRNQIIKTEEILNRLAGYAPKFIRPPY
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
GEILEDQLKWATEKNFMIVQWSVDTVDWKGVSAETITNNVLGNSFPGSVILQHSTPGGHL
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC
QGSVDALDKIIPQLKTKGARFVTLPSMFQTSKERK
CCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCC
>Mature Secondary Structure
MYYFYSPEGFAPYQWGLERDVSYAYMPYNLFYYGDYIRTLPYTYTPQSYEVQMKADERGS
CEEEECCCCCCCHHCCCCCCCEEEEECEEEEEECCCHHHCCCEECCCCEEEEEEECCCCC
WTPFSWVEKYAYAFSGPYNKAEVALTFDDGPDLEFTPKILDKLKQHNVKATFFLLGENAE
CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECHHHHHHHHHCCCEEEEEEECCCHH
KFPNVVKRIANEGHVIGNHTYSHPNLAKVNDAEYRNQIIKTEEILNRLAGYAPKFIRPPY
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
GEILEDQLKWATEKNFMIVQWSVDTVDWKGVSAETITNNVLGNSFPGSVILQHSTPGGHL
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCC
QGSVDALDKIIPQLKTKGARFVTLPSMFQTSKERK
CCCHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: chitin; H2O

Specific reaction: chitin + H2O = chitosan + acetate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]