| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is livF [H]
Identifier: 118477393
GI number: 118477393
Start: 1866283
End: 1866984
Strand: Direct
Name: livF [H]
Synonym: BALH_1712
Alternate gene names: 118477393
Gene position: 1866283-1866984 (Clockwise)
Preceding gene: 118477392
Following gene: 118477394
Centisome position: 35.5
GC content: 34.19
Gene sequence:
>702_bases GTGGCACTATTACAAGTGAATAATATAGAGACGTATTTAGATCAGTTTCATATTTTACAAGGGGTATCTCTTGCTGTTGA AAAAGGAACAATTACTGTACTGTTTGGGAGAAATGGTGCAGGGAAGACTACGACATTACGTTCGGTTATGGGATTTCACC ATATTGCACATGGTGAAATTTATTATGATCGTACACAAGTAAATGGACTATCTACACATTTAATTTCAAGAAAAGGAATA GGGTATGTACCAGAAAATCAAGGTATTTTTCATGATCTGACAGTAGAAGAGACATTCGCTCTTGCTAGAGGAAAGGGCGA AGAAGCAGAAGAGAAAATCGAGTGGATGCTTGAATTATTTCCAGATTTAAAGCAGTTTTGGCATAAAAAAAGCGGGCTCT TAAGCGGAGGACAAAAGCAAATGCTAGCAATTTCAAGAGCGTTTATTAATAGTGATGGTTTATTACTTATTGATGAGCCG AGTAAAGGCTTGTCCCCCATTATGATAGAAAAGTTAATGATAGCCATTTTAAAAATGAAAGAGAAAACAACAGTTTTGCT CGTTGAACAAAATTTTATGATGGCTAGTCAAATTGGTGATTACTTTTATATTATGGATAACGGAAAAATTGTTCATAACG GTTTTATGCATGAATTAAAAGAGGATAAGGAAATGTGTCATAAATATTTAGGAATCTCTTAA
Upstream 100 bases:
>100_bases CTTATCGTTTTATTTCATGGAGAGTTATTGGCGGAAGGTTTGCCTGAAGAAATTATGAAAGATGAGCGAGTACAAAGTGC TTATTTAGGGGGATTATATA
Downstream 100 bases:
>100_bases CATGAATCCGAGGTGAGAAGGATGGATGTGTTAATCAATTTATTTGTAAATGGGATTTCAACAGGGATGCTCATTTTTTT ATTAGCGTCAGGTCTTTCGC
Product: branched-chain amino acid ABC transporter ATP-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MALLQVNNIETYLDQFHILQGVSLAVEKGTITVLFGRNGAGKTTTLRSVMGFHHIAHGEIYYDRTQVNGLSTHLISRKGI GYVPENQGIFHDLTVEETFALARGKGEEAEEKIEWMLELFPDLKQFWHKKSGLLSGGQKQMLAISRAFINSDGLLLIDEP SKGLSPIMIEKLMIAILKMKEKTTVLLVEQNFMMASQIGDYFYIMDNGKIVHNGFMHELKEDKEMCHKYLGIS
Sequences:
>Translated_233_residues MALLQVNNIETYLDQFHILQGVSLAVEKGTITVLFGRNGAGKTTTLRSVMGFHHIAHGEIYYDRTQVNGLSTHLISRKGI GYVPENQGIFHDLTVEETFALARGKGEEAEEKIEWMLELFPDLKQFWHKKSGLLSGGQKQMLAISRAFINSDGLLLIDEP SKGLSPIMIEKLMIAILKMKEKTTVLLVEQNFMMASQIGDYFYIMDNGKIVHNGFMHELKEDKEMCHKYLGIS >Mature_232_residues ALLQVNNIETYLDQFHILQGVSLAVEKGTITVLFGRNGAGKTTTLRSVMGFHHIAHGEIYYDRTQVNGLSTHLISRKGIG YVPENQGIFHDLTVEETFALARGKGEEAEEKIEWMLELFPDLKQFWHKKSGLLSGGQKQMLAISRAFINSDGLLLIDEPS KGLSPIMIEKLMIAILKMKEKTTVLLVEQNFMMASQIGDYFYIMDNGKIVHNGFMHELKEDKEMCHKYLGIS
Specific function: Probable component of a branched-chain amino-acid transport system [H]
COG id: COG0410
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=200, Percent_Identity=30.5, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI31657092, Length=213, Percent_Identity=29.5774647887324, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45446740, Length=200, Percent_Identity=32, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI47078218, Length=200, Percent_Identity=32, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI21536376, Length=215, Percent_Identity=28.8372093023256, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI153792144, Length=202, Percent_Identity=31.1881188118812, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI148612844, Length=224, Percent_Identity=27.6785714285714, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI255708477, Length=224, Percent_Identity=27.6785714285714, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI105990541, Length=191, Percent_Identity=30.8900523560209, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9955963, Length=216, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI150417984, Length=201, Percent_Identity=29.3532338308458, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4505771, Length=210, Percent_Identity=26.1904761904762, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI9961252, Length=210, Percent_Identity=26.1904761904762, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=29.0476190476191, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI9961250, Length=210, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=29.0476190476191, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI42490749, Length=222, Percent_Identity=26.1261261261261, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI42741659, Length=218, Percent_Identity=27.5229357798165, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI171184400, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27262624, Length=203, Percent_Identity=29.064039408867, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27262626, Length=203, Percent_Identity=29.064039408867, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27477115, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI27436953, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082268, Length=232, Percent_Identity=35.3448275862069, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI1789672, Length=225, Percent_Identity=28.8888888888889, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=30.4347826086957, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=29.1139240506329, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=25.3968253968254, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=29.9180327868852, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=30.1724137931034, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790162, Length=227, Percent_Identity=28.1938325991189, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1790467, Length=225, Percent_Identity=24.8888888888889, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1788761, Length=217, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=26.1261261261261, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=26.9406392694064, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI1790525, Length=217, Percent_Identity=27.6497695852535, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081782, Length=225, Percent_Identity=27.1111111111111, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1787370, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=27.7511961722488, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787112, Length=216, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=26.7857142857143, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1788450, Length=203, Percent_Identity=26.1083743842365, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87082267, Length=215, Percent_Identity=26.046511627907, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=28.125, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789873, Length=223, Percent_Identity=26.9058295964126, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787712, Length=217, Percent_Identity=24.8847926267281, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787792, Length=224, Percent_Identity=23.6607142857143, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786398, Length=229, Percent_Identity=25.3275109170306, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI87081709, Length=226, Percent_Identity=24.7787610619469, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786654, Length=225, Percent_Identity=25.3333333333333, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787143, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=25.764192139738, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=21.7391304347826, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788165, Length=175, Percent_Identity=30.8571428571429, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=30.0884955752212, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786803, Length=215, Percent_Identity=23.7209302325581, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=24.8847926267281, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1786563, Length=210, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1788897, Length=204, Percent_Identity=25.4901960784314, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=26.0663507109005, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788053, Length=164, Percent_Identity=28.0487804878049, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1787113, Length=211, Percent_Identity=27.9620853080569, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=31.5789473684211, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=31.5789473684211, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=31.5789473684211, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17510237, Length=217, Percent_Identity=28.110599078341, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17565586, Length=206, Percent_Identity=29.6116504854369, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533608, Length=225, Percent_Identity=28, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI25146777, Length=210, Percent_Identity=26.1904761904762, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71996550, Length=217, Percent_Identity=26.7281105990783, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71984940, Length=209, Percent_Identity=29.1866028708134, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71996809, Length=231, Percent_Identity=26.4069264069264, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193211015, Length=231, Percent_Identity=26.4069264069264, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193211017, Length=231, Percent_Identity=25.1082251082251, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=27.4774774774775, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17541710, Length=227, Percent_Identity=25.9911894273128, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212646699, Length=219, Percent_Identity=26.4840182648402, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558664, Length=238, Percent_Identity=25.2100840336134, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193208177, Length=223, Percent_Identity=25.5605381165919, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI221512771, Length=173, Percent_Identity=31.7919075144509, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=27.6315789473684, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24643674, Length=225, Percent_Identity=29.3333333333333, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI85725262, Length=164, Percent_Identity=28.6585365853659, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650855, Length=179, Percent_Identity=27.3743016759777, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650853, Length=179, Percent_Identity=27.3743016759777, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726357, Length=220, Percent_Identity=25.4545454545455, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI23397593, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24582014, Length=161, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582012, Length=161, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281362751, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574744, Length=207, Percent_Identity=25.1207729468599, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24659289, Length=225, Percent_Identity=26.6666666666667, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24648314, Length=219, Percent_Identity=26.027397260274, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI21357907, Length=214, Percent_Identity=25.2336448598131, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574150, Length=212, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007328, Length=212, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641565, Length=212, Percent_Identity=23.5849056603774, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24649703, Length=197, Percent_Identity=24.8730964467005, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26335; Mature: 26204
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLQVNNIETYLDQFHILQGVSLAVEKGTITVLFGRNGAGKTTTLRSVMGFHHIAHGEI CEEEEECCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEE YYDRTQVNGLSTHLISRKGIGYVPENQGIFHDLTVEETFALARGKGEEAEEKIEWMLELF EEEHHHCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHH PDLKQFWHKKSGLLSGGQKQMLAISRAFINSDGLLLIDEPSKGLSPIMIEKLMIAILKMK HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC EKTTVLLVEQNFMMASQIGDYFYIMDNGKIVHNGFMHELKEDKEMCHKYLGIS CCEEEEEEECCHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALLQVNNIETYLDQFHILQGVSLAVEKGTITVLFGRNGAGKTTTLRSVMGFHHIAHGEI EEEEECCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEE YYDRTQVNGLSTHLISRKGIGYVPENQGIFHDLTVEETFALARGKGEEAEEKIEWMLELF EEEHHHCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHHHHHHHH PDLKQFWHKKSGLLSGGQKQMLAISRAFINSDGLLLIDEPSKGLSPIMIEKLMIAILKMK HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC EKTTVLLVEQNFMMASQIGDYFYIMDNGKIVHNGFMHELKEDKEMCHKYLGIS CCEEEEEEECCHHHHHHCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]