Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is 118477132
Identifier: 118477132
GI number: 118477132
Start: 1589444
End: 1590355
Strand: Reverse
Name: 118477132
Synonym: BALH_1435
Alternate gene names: NA
Gene position: 1590355-1589444 (Counterclockwise)
Preceding gene: 118477133
Following gene: 118477130
Centisome position: 30.25
GC content: 36.51
Gene sequence:
>912_bases ATGAGTGTGAAAAAAGATTGGATTGCTCCTCTCGCTTTACTATTTGTCTCTTTTATTTGGGGAGCTACGTTTGTCGTCGT TCAAAATGCTATGTCTTTCGTTGGCCCATTTACTTTTAATGGTATTCGCTTTTTATTCGCTGGAATTATTTTATTATTCG TTCAAATACTTTTCTCAAAAAAAGCTTCAAAACAACATATAAAACAAAGTAGTCTCGCTGGATTAATCGTTGGGTTCTTT TTATGCGTTGGCTACGTCTTACAAACATTCGGCTTACTTTATACAACTTCTTCAAAAGCTGGTTTCTTAACAGGGCTTAG TATCGTTATGGTACCAATATTGTCTTTTATTTTTTTAAAACAAAAGGCTACCATTTTTATCGTAATTGGCATTGCGGTAG CAACAGCAGGTTTATACTTATTAACGGCTGGTGATTCTTTTCAATTAAACATTGGAGATATACTCGTTCTCGGTTGTGCA GTTGCTTTCGCTGCTCATATTCTCGTTAACGGCTTCTTCTCTAAAAAAATATCACCTTTATTGTTAAGTACATCGCAAGT ATTAGCTGTCGGACTGTTTTCTTCTATTTGCGCCTTTTTGTTTGAAGATTGGGAAAAATTATTTTCAGTAGCACTATGGA CGAATTCTTCCTTTTTATTTGCGCTATTTCTAACTTCCCTATTCGCGACATCCATTGCTTTTTTCATCCAAACGTCAGCA CAAAAACATACATCTCCAACGAGAGTAGCTATTATTTTCGCAATGGAGCCCGTTTTTGCTGCCTTAACAGGCGTTCTCGT TGCAAACGAACAACTTTCTATCTCTGCTATTATCGGATGCCTATGTATTTTCCTAGGTATGGTTTTCGTTGAATTACCTT CCAAAACAAAAAAAGAAGCGCAGGCTGCGTGA
Upstream 100 bases:
>100_bases AAAAGTTTCGATCTCTTTTTTATTAAGTGGATTCCAAGTAGTCAAAATAAAGTTGCTGATGAGTTAGCTAGAAAAGCTAT CTTACAAAATTAACGGGGGT
Downstream 100 bases:
>100_bases AGTTACGCTTGTAACTTCCGCATAAAAGCCTTAGCGCTTTTTTTATCTGTAATCTCTTCTTCTTTCAATCGTTCTAATAG CGCAACAAAATAACTGCCAT
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSVKKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKASKQHIKQSSLAGLIVGFF LCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCA VAFAAHILVNGFFSKKISPLLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSA QKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKEAQAA
Sequences:
>Translated_303_residues MSVKKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKASKQHIKQSSLAGLIVGFF LCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCA VAFAAHILVNGFFSKKISPLLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSA QKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKEAQAA >Mature_302_residues SVKKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSKKASKQHIKQSSLAGLIVGFFL CVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLKQKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAV AFAAHILVNGFFSKKISPLLLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSAQ KHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKEAQAA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32731; Mature: 32599
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC KASKQHIKQSSLAGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH QKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISPL CCCCEEEEHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKEA HCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC QAA CCC >Mature Secondary Structure SVKKDWIAPLALLFVSFIWGATFVVVQNAMSFVGPFTFNGIRFLFAGIILLFVQILFSK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC KASKQHIKQSSLAGLIVGFFLCVGYVLQTFGLLYTTSSKAGFLTGLSIVMVPILSFIFLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH QKATIFIVIGIAVATAGLYLLTAGDSFQLNIGDILVLGCAVAFAAHILVNGFFSKKISPL CCCCEEEEHHHHHHHCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLSTSQVLAVGLFSSICAFLFEDWEKLFSVALWTNSSFLFALFLTSLFATSIAFFIQTSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QKHTSPTRVAIIFAMEPVFAALTGVLVANEQLSISAIIGCLCIFLGMVFVELPSKTKKEA HCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC QAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]