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The map label for this gene is gerPF [H]

Identifier: 118476728

GI number: 118476728

Start: 1158881

End: 1159105

Strand: Reverse

Name: gerPF [H]

Synonym: BALH_1008

Alternate gene names: 118476728

Gene position: 1159105-1158881 (Counterclockwise)

Preceding gene: 118476729

Following gene: 118476721

Centisome position: 22.05

GC content: 39.56

Gene sequence:

>225_bases
GTGGATGATATGCCTTCTGTTGTTGGAAATCTCGTCGTTCAAAACAGTAACGGTTCTTTCAATTTAGGAGATTTTTATAA
CGTGTCTCCGAAAGAAAACACGAAAGCGTATAATGGATCCGGAGCTTCCAATGTTGGATTTGTCGTGAATACGTTTAACG
GTGTTAGTGCAACAAATACGTTTGATTCTGATGTAGCCGATCAAGATCAGATTGGAACAGCGTAA

Upstream 100 bases:

>100_bases
TGTTTTTAATAACTCTCGTATTATGCAAATCCGCCAATATATTACGGATGAACCTTCCGTTCAATAATTCATATAGTAAT
TAAAAAGCTTAGTAAAGTAG

Downstream 100 bases:

>100_bases
AAAAAGTAGGAGAATATCTCCTACTTTTTCTTTTATTTTATTTAAATGATAACCCGCTCTCCTCCAAAGCCTTTCTAAGC
TTTGGCAAAGATGCTGGTCC

Product: spore germination protein PF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MDDMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA

Sequences:

>Translated_74_residues
MDDMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA
>Mature_74_residues
MDDMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNTFDSDVADQDQIGTA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7712; Mature: 7712

Theoretical pI: Translated: 3.58; Mature: 3.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNT
CCCCCCCCCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCC
FDSDVADQDQIGTA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MDDMPSVVGNLVVQNSNGSFNLGDFYNVSPKENTKAYNGSGASNVGFVVNTFNGVSATNT
CCCCCCCCCEEEEECCCCCEECCCCEECCCCCCCCEECCCCCCCCCEEEECCCCCCCCCC
FDSDVADQDQIGTA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]