Click here to switch to the map view.

The map label for this gene is dhaS [H]

Identifier: 118476596

GI number: 118476596

Start: 999969

End: 1000544

Strand: Reverse

Name: dhaS [H]

Synonym: BALH_0871

Alternate gene names: 118476596

Gene position: 1000544-999969 (Counterclockwise)

Preceding gene: 118476598

Following gene: 118476595

Centisome position: 19.03

GC content: 30.21

Gene sequence:

>576_bases
ATGATTGAGATGACCTCTTCTATAATTTCTAAAAAGATAATCGCGAACTCATTGAAGTATTTAATGGAAACAGAGTCGTT
TCATAAAATATCAGTGAGCGATATTATGTTACACTGTCAAATGCGTAGGCAAACTTTTTATTATCATTTTAAAGATAAAT
TTGAACTATTAAGCTGGATTTATAGAGAAGAAACGAAAGAGAACATTATCGACTTTCTCGACTATGAAACGTGGGAAAAC
ATTTTTGATTTATTATTTGATTACTTTTACGAAAATCAAAAATTTTACCGAAATGCTTTTAAAGTCATTGAACAGAACTC
GTTTAATCACTATTTATTTGAGCATACGAAAAACTTATATATGAAGATTATTGATGAATTATCTGTGAGCTGTGGATTCA
GCCTTTCTGATGAGACAAAAAATACGATTGCCTCCTTTTATAGTCACGGCTTCGTTGGAACGATAAAAGATTGGATTGAA
AGCAAATGTGAAGTAGATCCTTCCATTATGTCTTCTCTCATGAAAAATATGATAAACAATCAATTACTACTATTACTGGA
ACAATCAGCAAAGTAA

Upstream 100 bases:

>100_bases
AAATGAAAGCGTTTTATAGTAAACGGACAAAATGGACAATCTGTCTAAAGACACCGCTCTCATTTATGGGTAGGATTTTC
ATATTACTAACATTCTAGGG

Downstream 100 bases:

>100_bases
TTAAAGGGTGGCAAAAGCAATGAAAAAGATTATGAATGATGTACAAAATATCGTTCAAGATATGCTGCATGGCTTTTATT
TTGAACATAACGACAAAGTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIEMTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYETWEN
IFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIE
SKCEVDPSIMSSLMKNMINNQLLLLLEQSAK

Sequences:

>Translated_191_residues
MIEMTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYETWEN
IFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIE
SKCEVDPSIMSSLMKNMINNQLLLLLEQSAK
>Mature_191_residues
MIEMTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYETWEN
IFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIE
SKCEVDPSIMSSLMKNMINNQLLLLLEQSAK

Specific function: In complex with dhaQ, upon activation by dihydroxyacetone, activates transcription of the dhaKLM operon. Binds the inverted repeat sequence 5'-GGACACATN(6)ATTTGTCC-3' located upstream of and partially overlapping with the -35 promoter sequence of the dhaK

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR012738
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22939; Mature: 22939

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREETKENIIDFLDYETWENIFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKCEVDPSIMSSLMKNMINN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QLLLLLEQSAK
HHEEHEECCCC
>Mature Secondary Structure
MIEMTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREETKENIIDFLDYETWENIFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKCEVDPSIMSSLMKNMINN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
QLLLLLEQSAK
HHEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]