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The map label for this gene is arcD [H]

Identifier: 118476500

GI number: 118476500

Start: 876618

End: 878141

Strand: Reverse

Name: arcD [H]

Synonym: BALH_0768

Alternate gene names: 118476500

Gene position: 878141-876618 (Counterclockwise)

Preceding gene: 118476503

Following gene: 118476499

Centisome position: 16.7

GC content: 38.85

Gene sequence:

>1524_bases
GTGCTTTTTTTGTTTTGTTTGGAACTTCTCTTCCTGACTCAGGAAGACATACATATCTCCTCGCTTGACTTGGTTATACT
AACTTTGGAGGTATTTTCTATGCAACAAAAAAAATGGGGCTTTTGGGTACTAACAGCTTTCGTTGTCGGTAATATGGTTG
GCGCTGGGATTTTCATGGTGCCAAGTACGTTGGCACAAACAGCAAGCCCTCTCGGTGTCACTTTAGCTTGGTTAACTACA
GGGTTTGGTGTTTTAATGCTAGCTCTTGTTTTCGGTAATTTAGCAATTCGACGTCCTGATTTAACGACAGGGCCACAAAG
TCATGCATATGCTTTATTCTCATCACCAAAAAAGAAAAAAATGGCTGGTTTCAGTATGGTATGGGGCTATTGGGTTGCAA
ACTGGGCAAGTAACGTTGCCATCATTACATCATTTGCAGGATATTTATCACTCTTCTTCCCAATTATGAAAGATACACGA
CTACTATTTTCAATCGGTTCGTTTAACGTAGAAGTCGGAAAACTAATTACATTTACGATTTGTTCCATCTTACTTTGGGG
AACTCATATTATATTAACAAACGGTGTAAGCGGAGCTGGAAAACTAAACTTCTTAGCAACAACAACGAAAGTAACTGGAT
TCCTTTTATTCATCGTCGTTACTTTATTTGCATTCGAAGCTTCTAAGTTTGGACAATGGTACACACCGATGATCGATAAA
TCAGGTGTATCACACGGCCTTCTTTCACAAGTAAATTTAGCTGCTCTTACAACGCTTTGGGCATTTATCGGAATTGAATC
AGCCGTTCTTTTATCAAACCGTGCTGTTTCTCCAAAAACAGTAAAACGTGCAACAGTTGCTGGATTACTTATTACAGTTG
CGATTTACTTAGGAATTACAATTTTAACAATGGGTGTACTTCACGTTGATACATTACAAGCCTCAGAACGTCCGTTAGCA
GATGCATTAAATGCTGCAATGGGTCACGGCGGCGGGAAACTGATGGCATTACTTGCTCTTACTTCCCTGTTCGGTTCGAT
TTTAGGCTGGATTTTATTAAGCTCAGAAGTACCATATCAAGCAGCAAAAGAAGGTTTCTTCCCTTCCTTCTTCGCAAAAA
CAAACAAAAAAGGAAGTCCAATTTATTCATTACGATTAACAAACATTATGTCGCAAGTGTTCTTATTCTCAACATTATCA
GGAACAATTGCAGAAGCTTATACATTCGTTATTACCGTATCAACACTCGCCTATCTCATTCCATATCTCGTTTCACCAAT
CTTCCAGTTAAAACTAGTCGCTACTGGTGAGACGTATAAAAATGAAATGCGGGCAAGAATTACGGACGGTATAGTTGCAG
TAATTGCACTTTGCTACGCACTATGGGTTATTAAAACGGGTGCATCCGATATAAAAACGTTCCTTCTCGGAATTGGTTTA
TTCGTAATCGGCTTTGCTTTCTATCCATTAATGAATCGTGATCAGAAAAAAAATAACGAAAAGAAAGACGGGCAAGTTGC
ATAA

Upstream 100 bases:

>100_bases
AATAAGTGCAGAACTGTCACAAACGTTTCGTTTGTGGAGAGCTATCGAGAGGTATGTCGTGGGTTTCTTATAAGATAGAA
AGCATGTAGCGGCAAATTAC

Downstream 100 bases:

>100_bases
CGCAATTTGCTCGTTTTTTCTTTTGCAAAACATATATAATAGAACAAAGAGGTGAAAAACATGTCAATCGAATCACTATG
GAGCAGCCGTTTCCAACAAC

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MLFLFCLELLFLTQEDIHISSLDLVILTLEVFSMQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTT
GFGVLMLALVFGNLAIRRPDLTTGPQSHAYALFSSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTR
LLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDK
SGVSHGLLSQVNLAALTTLWAFIGIESAVLLSNRAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHVDTLQASERPLA
DALNAAMGHGGGKLMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLS
GTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEMRARITDGIVAVIALCYALWVIKTGASDIKTFLLGIGL
FVIGFAFYPLMNRDQKKNNEKKDGQVA

Sequences:

>Translated_507_residues
MLFLFCLELLFLTQEDIHISSLDLVILTLEVFSMQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTT
GFGVLMLALVFGNLAIRRPDLTTGPQSHAYALFSSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTR
LLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDK
SGVSHGLLSQVNLAALTTLWAFIGIESAVLLSNRAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHVDTLQASERPLA
DALNAAMGHGGGKLMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLS
GTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEMRARITDGIVAVIALCYALWVIKTGASDIKTFLLGIGL
FVIGFAFYPLMNRDQKKNNEKKDGQVA
>Mature_507_residues
MLFLFCLELLFLTQEDIHISSLDLVILTLEVFSMQQKKWGFWVLTAFVVGNMVGAGIFMVPSTLAQTASPLGVTLAWLTT
GFGVLMLALVFGNLAIRRPDLTTGPQSHAYALFSSPKKKKMAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTR
LLFSIGSFNVEVGKLITFTICSILLWGTHIILTNGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDK
SGVSHGLLSQVNLAALTTLWAFIGIESAVLLSNRAVSPKTVKRATVAGLLITVAIYLGITILTMGVLHVDTLQASERPLA
DALNAAMGHGGGKLMALLALTSLFGSILGWILLSSEVPYQAAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLS
GTIAEAYTFVITVSTLAYLIPYLVSPIFQLKLVATGETYKNEMRARITDGIVAVIALCYALWVIKTGASDIKTFLLGIGL
FVIGFAFYPLMNRDQKKNNEKKDGQVA

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=468, Percent_Identity=31.4102564102564, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI2367353, Length=477, Percent_Identity=29.3501048218029, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790575, Length=399, Percent_Identity=24.5614035087719, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786908, Length=398, Percent_Identity=24.1206030150754, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI87082250, Length=370, Percent_Identity=25.6756756756757, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55156; Mature: 55156

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLFCLELLFLTQEDIHISSLDLVILTLEVFSMQQKKWGFWVLTAFVVGNMVGAGIFMV
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
PSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALFSSPKKKK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCHHH
MAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
CSILLWGTHIILTNGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDK
HHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SGVSHGLLSQVNLAALTTLWAFIGIESAVLLSNRAVSPKTVKRATVAGLLITVAIYLGIT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILTMGVLHVDTLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILLSSEVPYQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLI
HHHCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLVSPIFQLKLVATGETYKNEMRARITDGIVAVIALCYALWVIKTGASDIKTFLLGIGL
HHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FVIGFAFYPLMNRDQKKNNEKKDGQVA
HHHHHHHHHHCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MLFLFCLELLFLTQEDIHISSLDLVILTLEVFSMQQKKWGFWVLTAFVVGNMVGAGIFMV
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH
PSTLAQTASPLGVTLAWLTTGFGVLMLALVFGNLAIRRPDLTTGPQSHAYALFSSPKKKK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCHHH
MAGFSMVWGYWVANWASNVAIITSFAGYLSLFFPIMKDTRLLFSIGSFNVEVGKLITFTI
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
CSILLWGTHIILTNGVSGAGKLNFLATTTKVTGFLLFIVVTLFAFEASKFGQWYTPMIDK
HHHHHHCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SGVSHGLLSQVNLAALTTLWAFIGIESAVLLSNRAVSPKTVKRATVAGLLITVAIYLGIT
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILTMGVLHVDTLQASERPLADALNAAMGHGGGKLMALLALTSLFGSILGWILLSSEVPYQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAKEGFFPSFFAKTNKKGSPIYSLRLTNIMSQVFLFSTLSGTIAEAYTFVITVSTLAYLI
HHHCCCCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYLVSPIFQLKLVATGETYKNEMRARITDGIVAVIALCYALWVIKTGASDIKTFLLGIGL
HHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FVIGFAFYPLMNRDQKKNNEKKDGQVA
HHHHHHHHHHCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]