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The map label for this gene is yocH [H]

Identifier: 118476458

GI number: 118476458

Start: 832273

End: 833589

Strand: Reverse

Name: yocH [H]

Synonym: BALH_0723

Alternate gene names: 118476458

Gene position: 833589-832273 (Counterclockwise)

Preceding gene: 118476459

Following gene: 118476451

Centisome position: 15.86

GC content: 40.39

Gene sequence:

>1317_bases
ATGTTTTTCGCAAATAAGAAAATAATGGTTGCTATAATGAGGTCAACGAAAACAAATGCAATGGAGGCTATTATGAAAAA
ATTTATGGGTATAGCAACAGCAGCGGTTTTTGGTCTTGGGATTTTCACAACATCTGCTAAAGCAGAAACAATCGTAACGA
CTGATGTACTAAATGTACGAGAAAACCCAACTACTGAATCAAAAGTTGTAGGAAAATTATTAGATGGATATAAAGTTAAC
GTTTTACATACAGAAAACGGATGGTCAAAAGTGAAATTGAATAGCGGTAAAGAAGCTTTCATTAGCGCTGACTACACAAA
AGACACTTACTACGTAACAGCTAACGTATTAAACGTACGTGCTGGTGCAAACACAGACTCAGAAATTCTTGGTAAATTGA
AACAAGATGATGTAATTGAAACAACACACCAAGTTGAAAATGATTGGATCCAATTTGAATATAACGGAAAAACAGCTTAT
GTTCATGTTCCTTACTTAACAGGTAAAGCTCCAGTTAAAGTTCAACCAGCAGTAAAAGTTGAAAAAACAACGAAAGTTCA
AGATACAGCTAAAACTGTAGCAGCAACTAAAGCTCGTGAAGTAGCTGAAACGCAAGCTAAAGCTCAAGAGGCAACTAAAG
CTCGTGAAGCAGCTGAAGCTCAAGCAGCGGCTAAAGCCGAGGAGGCAGCTAAAGCTCGTGAAGCAGCTAAAGCTCAAGCA
GAAGCTAAGGCTCAGGCAGCAGCTGAAGCTCAAGCAGAAGCTAAGGCTCAAGAAGCAGCTAAAGCTCGTGAAGCAGCTAA
AGCTCAAGAAGCAGCTGAAGCTCAAGCAGCGGCTAAAGCTCAAGAAGCAGCTAAAGCTCGTGAAGCAGCTAAGACTCAAG
AAGCAGCTGAAGCTCGTGAAGCAGCTAAAGCTCAAGAGGCAGCTAAAGCTCGTGAAGCGGCTAAAGCTCAAAAACCAGCT
ACACAACAACCTGTTGTAAAAGAAACTGAAACAAGTGCACCATCATCTTCTCGTGAACTACGCGTTGTAGCAACAGCTTA
CACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAAGTAAAATCAGCTATGGGTCATAACTTAACAGCTAATC
CAAACATGAAACTAATCGCAGTTGATCCAAGTGTCATTCCATTAGGTTCAAAAGTATGGGTTGAAGGTTACGGAGTAGCA
ATCGCTGGTGATACTGGTGGAGCTATTAAAGGAAACAAAATCGACGTTTTAATGCCAGACAAAGGTACATCAAGTAACTG
GGGACGTAAAACAGTTACAGTTAAAGTATTAAACTAG

Upstream 100 bases:

>100_bases
ATGCTCAAACCTCCCCTAAAAACTATATGAAAGCGTTTTTAGGATATTACTGGAATTATTACAGAATATTAATGCCCCGT
TACGAAAGCTTTGTAATTCT

Downstream 100 bases:

>100_bases
TTCGTATAAAAAGAGTCAGTCTCATTGAGGCTGACTCTTTTTGCGCTCCTTCTAAAGAAAATATACTTCTATCTGAAATT
ATATCAACGATTTTTCAAAT

Product: enterotoxin/cell wall-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVN
VLHTENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAY
VHVPYLTGKAPVKVQPAVKVEKTTKVQDTAKTVAATKAREVAETQAKAQEATKAREAAEAQAAAKAEEAAKAREAAKAQA
EAKAQAAAEAQAEAKAQEAAKAREAAKAQEAAEAQAAAKAQEAAKAREAAKTQEAAEAREAAKAQEAAKAREAAKAQKPA
TQQPVVKETETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSAMGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVA
IAGDTGGAIKGNKIDVLMPDKGTSSNWGRKTVTVKVLN

Sequences:

>Translated_438_residues
MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVN
VLHTENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAY
VHVPYLTGKAPVKVQPAVKVEKTTKVQDTAKTVAATKAREVAETQAKAQEATKAREAAEAQAAAKAEEAAKAREAAKAQA
EAKAQAAAEAQAEAKAQEAAKAREAAKAQEAAEAQAAAKAQEAAKAREAAKTQEAAEAREAAKAQEAAKAREAAKAQKPA
TQQPVVKETETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSAMGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVA
IAGDTGGAIKGNKIDVLMPDKGTSSNWGRKTVTVKVLN
>Mature_438_residues
MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVN
VLHTENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAY
VHVPYLTGKAPVKVQPAVKVEKTTKVQDTAKTVAATKAREVAETQAKAQEATKAREAAEAQAAAKAEEAAKAREAAKAQA
EAKAQAAAEAQAEAKAQEAAKAREAAKAQEAAEAQAAAKAQEAAKAREAAKTQEAAEAREAAKAQEAAKAREAAKAQKPA
TQQPVVKETETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSAMGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVA
IAGDTGGAIKGNKIDVLMPDKGTSSNWGRKTVTVKVLN

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 46425; Mature: 46425

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVR
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECC
ENPTTESKVVGKLLDGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVR
CCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEE
AGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKV
CCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEEEEECCCCCEEECCCEEE
EKTTKVQDTAKTVAATKAREVAETQAKAQEATKAREAAEAQAAAKAEEAAKAREAAKAQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKAQAAAEAQAEAKAQEAAKAREAAKAQEAAEAQAAAKAQEAAKAREAAKTQEAAEARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAQEAAKAREAAKAQKPATQQPVVKETETSAPSSSRELRVVATAYTADPLENGYKAGD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCHH
QVKSAMGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPD
HHHHHHCCCCCCCCCEEEEEECCCEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEECC
KGTSSNWGRKTVTVKVLN
CCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVR
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECC
ENPTTESKVVGKLLDGYKVNVLHTENGWSKVKLNSGKEAFISADYTKDTYYVTANVLNVR
CCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEE
AGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKAPVKVQPAVKV
CCCCCCHHHHHHCCCCHHHHHHHHCCCCEEEEEECCEEEEEEEEEECCCCCEEECCCEEE
EKTTKVQDTAKTVAATKAREVAETQAKAQEATKAREAAEAQAAAKAEEAAKAREAAKAQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAKAQAAAEAQAEAKAQEAAKAREAAKAQEAAEAQAAAKAQEAAKAREAAKTQEAAEARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKAQEAAKAREAAKAQKPATQQPVVKETETSAPSSSRELRVVATAYTADPLENGYKAGD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCHH
QVKSAMGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPD
HHHHHHCCCCCCCCCEEEEEECCCEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEECC
KGTSSNWGRKTVTVKVLN
CCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]