Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yjjU [H]
Identifier: 118476417
GI number: 118476417
Start: 789893
End: 790747
Strand: Direct
Name: yjjU [H]
Synonym: BALH_0679
Alternate gene names: 118476417
Gene position: 789893-790747 (Clockwise)
Preceding gene: 118476416
Following gene: 118476418
Centisome position: 15.03
GC content: 35.79
Gene sequence:
>855_bases ATGCTTGAAAATACGGGATTAGTATTAGAAGGCGGCGGTATGCGTGGTGTATATACGGGCGGGATATTAGAATACTTTAT GGAACAAGATTTATATTTTCCATATGTAATCGGTGTATCAGCTGGTGCTTGTCATGCAGCGTCGTATCTTTCCAGACAAA GAAATAGAAATAAAACGGTCAATATTGATTATGCATCACATCCAAAATATTTATCGTATAAAAATTTATGGAGAAAACGT CAGCTATTTGATATGGATTTCATTTTTCATGAAATTCCAGAAAAGCATGTGCCGTTTGATTTTGAAACATACTTTAATAG CCCAGAACGTTTTCTTGTAGGAACGACGGATTGTGAAACAGGACAGTCTGTTTATTTTGAAAAAGAAGGAACGAATGATG ATGCACTAAATTTATTACAAGCGTCTAGTTCATTGCCTTTCATTGCACCAGTAGTAAATTATCGTGGTAAGCAACTGTTA GATGGTGGGATTTCTGATCCGATTCCAGTTCGTAAAGCACAGGAAGATGGATTTAAAAAATCAGTCGTAATTTTAACAAG AAATCACGGTTACGCGAAGAAAAAATCAAGATTTGGGTGGGTTGCCGCGAAAGCTTATAAAAAATATCCGAACCTTGTGA ATACGATGCTAAATCGTTATGAAGTGTATAATGAAACACTTCACTACATTGAAAAAGAAGAACAGGCAGGTAATTTATTT GTTATTCGTCCAGAAGTACCGCTTCAAGTAGATCGTATGGAAAAGGATACGGCTAAATTACAAAGTTTATATGAGCAAGG CTATGAAGATGCAAAGAGACAATTTGCAGATTTGCAGGCGTTCTTGCAAAAATAA
Upstream 100 bases:
>100_bases TCTTTTGAATATAATTTCTAAAAGAACTCATATATAATAGAAACAGATACTTAACATAGTGAATAATTAAAGAGTCAATA TATAAAGAGGAGAGAATAAC
Downstream 100 bases:
>100_bases GTATTAGGCTGTGGAGAAGAATTTCTCTACAGTCTTTTTTGTATTGCTTGCTTATCCGTTACTTTTTAAAAATGTATGAA TGTTTAAGTGTTTAAAGAGT
Product: phospholipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLENTGLVLEGGGMRGVYTGGILEYFMEQDLYFPYVIGVSAGACHAASYLSRQRNRNKTVNIDYASHPKYLSYKNLWRKR QLFDMDFIFHEIPEKHVPFDFETYFNSPERFLVGTTDCETGQSVYFEKEGTNDDALNLLQASSSLPFIAPVVNYRGKQLL DGGISDPIPVRKAQEDGFKKSVVILTRNHGYAKKKSRFGWVAAKAYKKYPNLVNTMLNRYEVYNETLHYIEKEEQAGNLF VIRPEVPLQVDRMEKDTAKLQSLYEQGYEDAKRQFADLQAFLQK
Sequences:
>Translated_284_residues MLENTGLVLEGGGMRGVYTGGILEYFMEQDLYFPYVIGVSAGACHAASYLSRQRNRNKTVNIDYASHPKYLSYKNLWRKR QLFDMDFIFHEIPEKHVPFDFETYFNSPERFLVGTTDCETGQSVYFEKEGTNDDALNLLQASSSLPFIAPVVNYRGKQLL DGGISDPIPVRKAQEDGFKKSVVILTRNHGYAKKKSRFGWVAAKAYKKYPNLVNTMLNRYEVYNETLHYIEKEEQAGNLF VIRPEVPLQVDRMEKDTAKLQSLYEQGYEDAKRQFADLQAFLQK >Mature_284_residues MLENTGLVLEGGGMRGVYTGGILEYFMEQDLYFPYVIGVSAGACHAASYLSRQRNRNKTVNIDYASHPKYLSYKNLWRKR QLFDMDFIFHEIPEKHVPFDFETYFNSPERFLVGTTDCETGQSVYFEKEGTNDDALNLLQASSSLPFIAPVVNYRGKQLL DGGISDPIPVRKAQEDGFKKSVVILTRNHGYAKKKSRFGWVAAKAYKKYPNLVNTMLNRYEVYNETLHYIEKEEQAGNLF VIRPEVPLQVDRMEKDTAKLQSLYEQGYEDAKRQFADLQAFLQK
Specific function: Probable lipid hydrolase [H]
COG id: COG4667
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 patatin domain [H]
Homologues:
Organism=Escherichia coli, GI1790837, Length=277, Percent_Identity=28.8808664259928, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016035 - InterPro: IPR002641 [H]
Pfam domain/function: PF01734 Patatin [H]
EC number: NA
Molecular weight: Translated: 32728; Mature: 32728
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLENTGLVLEGGGMRGVYTGGILEYFMEQDLYFPYVIGVSAGACHAASYLSRQRNRNKTV CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEE NIDYASHPKYLSYKNLWRKRQLFDMDFIFHEIPEKHVPFDFETYFNSPERFLVGTTDCET EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCC GQSVYFEKEGTNDDALNLLQASSSLPFIAPVVNYRGKQLLDGGISDPIPVRKAQEDGFKK CCEEEEECCCCCHHHHHHHHHCCCCCEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCE SVVILTRNHGYAKKKSRFGWVAAKAYKKYPNLVNTMLNRYEVYNETLHYIEKEEQAGNLF EEEEEECCCCCCHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VIRPEVPLQVDRMEKDTAKLQSLYEQGYEDAKRQFADLQAFLQK EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLENTGLVLEGGGMRGVYTGGILEYFMEQDLYFPYVIGVSAGACHAASYLSRQRNRNKTV CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEE NIDYASHPKYLSYKNLWRKRQLFDMDFIFHEIPEKHVPFDFETYFNSPERFLVGTTDCET EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCC GQSVYFEKEGTNDDALNLLQASSSLPFIAPVVNYRGKQLLDGGISDPIPVRKAQEDGFKK CCEEEEECCCCCHHHHHHHHHCCCCCEEHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCE SVVILTRNHGYAKKKSRFGWVAAKAYKKYPNLVNTMLNRYEVYNETLHYIEKEEQAGNLF EEEEEECCCCCCHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VIRPEVPLQVDRMEKDTAKLQSLYEQGYEDAKRQFADLQAFLQK EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]