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The map label for this gene is ssuC [C]

Identifier: 118476402

GI number: 118476402

Start: 774409

End: 775161

Strand: Direct

Name: ssuC [C]

Synonym: BALH_0663

Alternate gene names: 118476402

Gene position: 774409-775161 (Clockwise)

Preceding gene: 118476401

Following gene: 118476403

Centisome position: 14.73

GC content: 37.45

Gene sequence:

>753_bases
ATGAGCCGTTTGAAAGAATTAATTCCTGCCCTTACGCTTTCTAGTATTTTACTTACTATATGGGAAGTAGGAGCAAGAAT
TGTAGATGAAATGTACATTTTACCGTCACCATCTGCAATTGTAATGAAAATATGGAAACTAAAAGATATATTATTTACGG
TTCATTTGCCGGCAACATTATATGTCGTTTTAATAGGTGTTGTTATTTCTGTTGTATTAGGTGTAGGGCTAGCGATGTTA
ATGAATGCGAGTTCATGGATGGAGAGAGCATTTTATCCATTATTAGTTGCTTCACAAACGATTCCTATTACAGCGCTCGC
TCCGCTTTTCGTTTTATGGTTCGGATATACGATTTGGAGTAAGGTTGTTGTTACAGTTTTAATTACGTTTTTCCCAATTG
CGGTCAATACGTATGACGGGCTACGCAGTACGAAAAAAGAATGGGAAGAGCTTTTAGTTACGTACGGGGCAACGAAAAAA
GATGTTTTTCTTAAATTAAAATTGCCGTCTGCTCTTCCTTATTTTTTCTCAGCTTTAAAAATTGCAGTTCCGCTTAGTGT
AATTGGGGCAGCAATTGGTGAATGGCTCGGAGCGCAAGCGGGGCTAGGATATTTCAGTAAGAGAATGATGACACAGTTAG
ACGGAGCAGGTGTATTTGCACCCATTGTATTGTTATCATTATTAGCTATTTTCTTCGTCATCCTTATTTCGGTATTAGAA
AAGAAATTCATTAGTTGGAGGAAGCATTCATGA

Upstream 100 bases:

>100_bases
CGCTTGATCGTAATCGGACAAGAAAAGATTTATATAAGCCTGAAGTGTTAGCGCTTAAAGATGAGCTACTTAGTATGTTA
CAAAGGCAGGTACTTGTATA

Downstream 100 bases:

>100_bases
AATTTTTAAAACGCATCTTTGTGTTTACATTATTAGTTGCAATGATTGCTGGATGTTCTAGTAATTCAGCATCAGATAAG
AGTAAAAAAGAAAAAGAAAT

Product: hydroxymethylpyrimidine ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSRLKELIPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPATLYVVLIGVVISVVLGVGLAML
MNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKK
DVFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILISVLE
KKFISWRKHS

Sequences:

>Translated_250_residues
MSRLKELIPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPATLYVVLIGVVISVVLGVGLAML
MNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKK
DVFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILISVLE
KKFISWRKHS
>Mature_249_residues
SRLKELIPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPATLYVVLIGVVISVVLGVGLAMLM
NASSWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWSKVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKD
VFLKLKLPSALPYFFSALKIAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILISVLEK
KFISWRKHS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=216, Percent_Identity=30.0925925925926, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786564, Length=201, Percent_Identity=24.8756218905473, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27727; Mature: 27596

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLKELIPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPATL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH
IAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILISVLE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKFISWRKHS
HHHHHHCCCC
>Mature Secondary Structure 
SRLKELIPALTLSSILLTIWEVGARIVDEMYILPSPSAIVMKIWKLKDILFTVHLPATL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YVVLIGVVISVVLGVGLAMLMNASSWMERAFYPLLVASQTIPITALAPLFVLWFGYTIWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KVVVTVLITFFPIAVNTYDGLRSTKKEWEELLVTYGATKKDVFLKLKLPSALPYFFSALK
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHH
IAVPLSVIGAAIGEWLGAQAGLGYFSKRMMTQLDGAGVFAPIVLLSLLAIFFVILISVLE
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKFISWRKHS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]