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The map label for this gene is yclF [H]

Identifier: 118476370

GI number: 118476370

Start: 726484

End: 727890

Strand: Reverse

Name: yclF [H]

Synonym: BALH_0628

Alternate gene names: 118476370

Gene position: 727890-726484 (Counterclockwise)

Preceding gene: 118476373

Following gene: 118476366

Centisome position: 13.85

GC content: 37.95

Gene sequence:

>1407_bases
TTGTGTCAGGAGGAAAATAACATGGAATCAGCGATACAACTAGAAAGAGAACAACAAAGAAAAAAGAAACATCCTCCAGG
TTTATACTTACTCTTCTTTACAGAAATGTGGGAAAGATTTAGTTACTATGGATTACGAGGATTATTAACATTATATTTAA
CGACAGCTTTAGTAAGCGGTGGTCTTGGGTTTAGTCCCGCATGGGCACTCTCCATTTACGGATTTTATACTGGAGCCTGT
TATTTCACACCAATGATTGGTGGATACTTGACAGACCGGTTCCTAGGTAGACGAAAAGCCATCACAATTGGTGGTATAAC
AATGGCAATCGGTAACCTTACACTATTCGCCATGCAAAACCAAGTCGGCCTATACCTCGGATTAGCGCTTATTATTATCG
GTAATGGATTCTTCAAACCGAATATCTCTACACTGGTTGGGGAATTATACGAAGAGAACGATCCAAAACGTGATAGTGCA
TTTACTATTTTCTATATGGGTATTAACGTCGGGTCATTTTTAGCTCCACTCGTTTGCGGATTTTTATCAGAAAATTTATT
CAAAACAACAGTTGATGGCGTTGTACATTACGGATTCCGTTACGGTTTCTTAGCCGCTTCAATTGGAATGATTATCGGAC
AAATTTTATTTACAACATTATCAAATCGCTTCCTTGGTGATATCGGTAAAAAACCAACTCGCGATTTGCAAACAACAGAT
GGACAACCATCAGTAGGAGATACACCGTTAACAAAAAAAGAAAAACAACGTACCGCAGTTATCGTCATTTTAACATGCTT
CGTTGTCTTCTTCTGGGCTGGCTTTGAACAAGCTGGTAGTTCATTAACATTATATACAAACAAATTTGTAGACCGCTCTG
TGTTCGGATGGGAAGTTCCAACATCTTGGTTCCAGTCGGTCAATCCATTATTTATTATTTTACTTGCTCCAGTTATTTCA
GCATTGTGGGCAAAACTTGCAACTCGCAAGCGCGGGGATTTAAAAATCCCAACAAAAATGGGACTTGGTATGATCTTGCT
TGGTATCGGTTATATTATTCTCGTTATCGCTACATTAAAAACAGGTAGTGATGAACATAACATTACAGAAAAAGCAAACT
TACTATTTATCGTCTTTACGTATCTTTTCCATACGTTAGGTGAGCTATTCTTATCGCCTGTTGGACTATCAATGGTTAGT
GCACTTGCCCCAGTAAAACTTGCTTCTTTATTAATGGGAGTATGGTTAGCAAGCTCAGGTATCGCTAACATTTTAGGCGG
ACAACTTGCCAGCTTCACAACTTCACTTGGATATGCTGAAGTATTTACAGTTATTGGAGCTGTAGCAATTGTATTAGGTT
GTGTTTTATTACTAATTTCTAAGAAATTAGTGAAATGGATGGATTAA

Upstream 100 bases:

>100_bases
ATCCCTTTTCCAATTTCTTCTGAAAAATCAACCTTTATTGACTTATAATAGTTAATAAGGTAAAATATTAAATGTACAAA
ATTATTAACTTTGTTTTTGT

Downstream 100 bases:

>100_bases
AAAAAGATGAGGGATTTCCCTCATCTTTTTTATTTCTTCGCCTTCGTTCCTACTAAATCACCAGCAACAACATAACGTTT
CGAATTATCTTTCACAGATA

Product: peptide symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MCQEENNMESAIQLEREQQRKKKHPPGLYLLFFTEMWERFSYYGLRGLLTLYLTTALVSGGLGFSPAWALSIYGFYTGAC
YFTPMIGGYLTDRFLGRRKAITIGGITMAIGNLTLFAMQNQVGLYLGLALIIIGNGFFKPNISTLVGELYEENDPKRDSA
FTIFYMGINVGSFLAPLVCGFLSENLFKTTVDGVVHYGFRYGFLAASIGMIIGQILFTTLSNRFLGDIGKKPTRDLQTTD
GQPSVGDTPLTKKEKQRTAVIVILTCFVVFFWAGFEQAGSSLTLYTNKFVDRSVFGWEVPTSWFQSVNPLFIILLAPVIS
ALWAKLATRKRGDLKIPTKMGLGMILLGIGYIILVIATLKTGSDEHNITEKANLLFIVFTYLFHTLGELFLSPVGLSMVS
ALAPVKLASLLMGVWLASSGIANILGGQLASFTTSLGYAEVFTVIGAVAIVLGCVLLLISKKLVKWMD

Sequences:

>Translated_468_residues
MCQEENNMESAIQLEREQQRKKKHPPGLYLLFFTEMWERFSYYGLRGLLTLYLTTALVSGGLGFSPAWALSIYGFYTGAC
YFTPMIGGYLTDRFLGRRKAITIGGITMAIGNLTLFAMQNQVGLYLGLALIIIGNGFFKPNISTLVGELYEENDPKRDSA
FTIFYMGINVGSFLAPLVCGFLSENLFKTTVDGVVHYGFRYGFLAASIGMIIGQILFTTLSNRFLGDIGKKPTRDLQTTD
GQPSVGDTPLTKKEKQRTAVIVILTCFVVFFWAGFEQAGSSLTLYTNKFVDRSVFGWEVPTSWFQSVNPLFIILLAPVIS
ALWAKLATRKRGDLKIPTKMGLGMILLGIGYIILVIATLKTGSDEHNITEKANLLFIVFTYLFHTLGELFLSPVGLSMVS
ALAPVKLASLLMGVWLASSGIANILGGQLASFTTSLGYAEVFTVIGAVAIVLGCVLLLISKKLVKWMD
>Mature_468_residues
MCQEENNMESAIQLEREQQRKKKHPPGLYLLFFTEMWERFSYYGLRGLLTLYLTTALVSGGLGFSPAWALSIYGFYTGAC
YFTPMIGGYLTDRFLGRRKAITIGGITMAIGNLTLFAMQNQVGLYLGLALIIIGNGFFKPNISTLVGELYEENDPKRDSA
FTIFYMGINVGSFLAPLVCGFLSENLFKTTVDGVVHYGFRYGFLAASIGMIIGQILFTTLSNRFLGDIGKKPTRDLQTTD
GQPSVGDTPLTKKEKQRTAVIVILTCFVVFFWAGFEQAGSSLTLYTNKFVDRSVFGWEVPTSWFQSVNPLFIILLAPVIS
ALWAKLATRKRGDLKIPTKMGLGMILLGIGYIILVIATLKTGSDEHNITEKANLLFIVFTYLFHTLGELFLSPVGLSMVS
ALAPVKLASLLMGVWLASSGIANILGGQLASFTTSLGYAEVFTVIGAVAIVLGCVLLLISKKLVKWMD

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=383, Percent_Identity=26.1096605744125, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI226371746, Length=353, Percent_Identity=26.9121813031161, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226371748, Length=344, Percent_Identity=25.8720930232558, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1786927, Length=498, Percent_Identity=31.5261044176707, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1790572, Length=457, Percent_Identity=30.8533916849015, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1787922, Length=494, Percent_Identity=29.5546558704453, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1789911, Length=496, Percent_Identity=27.4193548387097, Blast_Score=191, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI71987453, Length=376, Percent_Identity=25.2659574468085, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569141, Length=166, Percent_Identity=31.3253012048193, Blast_Score=68, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322946, Length=520, Percent_Identity=22.6923076923077, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571098, Length=412, Percent_Identity=26.6990291262136, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI28571102, Length=412, Percent_Identity=26.2135922330097, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571100, Length=412, Percent_Identity=26.2135922330097, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24639585, Length=334, Percent_Identity=26.3473053892216, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24639583, Length=334, Percent_Identity=26.3473053892216, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24639581, Length=348, Percent_Identity=26.1494252873563, Blast_Score=93, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 51429; Mature: 51429

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00501 SPASE_I_1 ; PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQEENNMESAIQLEREQQRKKKHPPGLYLLFFTEMWERFSYYGLRGLLTLYLTTALVSG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGFSPAWALSIYGFYTGACYFTPMIGGYLTDRFLGRRKAITIGGITMAIGNLTLFAMQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCEEEEEECC
QVGLYLGLALIIIGNGFFKPNISTLVGELYEENDPKRDSAFTIFYMGINVGSFLAPLVCG
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHH
FLSENLFKTTVDGVVHYGFRYGFLAASIGMIIGQILFTTLSNRFLGDIGKKPTRDLQTTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQPSVGDTPLTKKEKQRTAVIVILTCFVVFFWAGFEQAGSSLTLYTNKFVDRSVFGWEVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHCCCCCCCCCC
TSWFQSVNPLFIILLAPVISALWAKLATRKRGDLKIPTKMGLGMILLGIGYIILVIATLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGSDEHNITEKANLLFIVFTYLFHTLGELFLSPVGLSMVSALAPVKLASLLMGVWLASSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IANILGGQLASFTTSLGYAEVFTVIGAVAIVLGCVLLLISKKLVKWMD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCQEENNMESAIQLEREQQRKKKHPPGLYLLFFTEMWERFSYYGLRGLLTLYLTTALVSG
CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGFSPAWALSIYGFYTGACYFTPMIGGYLTDRFLGRRKAITIGGITMAIGNLTLFAMQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCEEEEEECC
QVGLYLGLALIIIGNGFFKPNISTLVGELYEENDPKRDSAFTIFYMGINVGSFLAPLVCG
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHH
FLSENLFKTTVDGVVHYGFRYGFLAASIGMIIGQILFTTLSNRFLGDIGKKPTRDLQTTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQPSVGDTPLTKKEKQRTAVIVILTCFVVFFWAGFEQAGSSLTLYTNKFVDRSVFGWEVP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEEHHHHCCCCCCCCCC
TSWFQSVNPLFIILLAPVISALWAKLATRKRGDLKIPTKMGLGMILLGIGYIILVIATLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGSDEHNITEKANLLFIVFTYLFHTLGELFLSPVGLSMVSALAPVKLASLLMGVWLASSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IANILGGQLASFTTSLGYAEVFTVIGAVAIVLGCVLLLISKKLVKWMD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]