Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is glnP [H]
Identifier: 118476327
GI number: 118476327
Start: 679578
End: 680234
Strand: Direct
Name: glnP [H]
Synonym: BALH_0582
Alternate gene names: 118476327
Gene position: 679578-680234 (Clockwise)
Preceding gene: 118476326
Following gene: 118476328
Centisome position: 12.93
GC content: 36.68
Gene sequence:
>657_bases GTGCCTGATTTTGCTATATTAACGAATAACATTGATATGTATTTAGAAGGCTTTAAATATACAGTGGTGTCTAGTGTAAT CGCATTAATAGGCAGTTTTATTTTAGGTGTAGTATTGGCGATAATGCGTATTGCACCCATTCGTATTTTAAATTGGTTGG GTACTGCTTTTGTAGAGTTCGTAAGAAATATTCCACTCGTATTAATTGCATTTATATTCTATTTCGCTTTACCTGTAGTA GGAATTACTTTAAATGGTTTTGTAGCAGGAACAGTTACGCTTACCGTATATACTGCAGCGTTTATTGCGGAAGTCATTCG CGCTGGTATTTTATCAGTCGCGAAAGGCCAAATGGAGGCAGCACGTTCTTCAGGATTGACGTATACGCAAGCGATGTATC ATGTCGTTTTACCCCAAGCGATGAAAATTGTAATCCCTCCTCTAGGAAACCAATTTCTCAACTTAGTAAAAAACTCTTCC ATACTCGGAATTATTGCTGGTGCTGATTTAATGTATCAAGGAGATTTAATTTCAACGAAGACGTTTGTTACGTTCGATGT TTATATATTTGTCGGGATGTTTTATTTAATATTAACAATTCCGCTCAGTATGCTAGTGCGTTATTTAGAAAAACGCTTGG CAAAGGAGGCGGTGTAA
Upstream 100 bases:
>100_bases TGTATGAAAAATGGATTGGACAAAAACCAGAAAAGTAGATAGTAAAAGTGAGAGGATGAGAGTACTCATCCTCTTCTTGT AAAGAAAGAGGGGAGAATAT
Downstream 100 bases:
>100_bases ATGGATTTTAAGGGAGCTCTAACGGGTGATCATATTCTCTTTTTATTAAAAGGATTACTCATCACATTAGAGGTAGCACT CGTAGCGATTGTACTTAGCT
Product: glutamine ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPDFAILTNNIDMYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVV GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSS ILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLAKEAV
Sequences:
>Translated_218_residues MPDFAILTNNIDMYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVV GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSS ILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLAKEAV >Mature_217_residues PDFAILTNNIDMYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIFYFALPVVG ITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSI LGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLAKEAV
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=35.5769230769231, Blast_Score=146, Evalue=9e-37, Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=33.8028169014084, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=29.0909090909091, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=30, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=31.6831683168317, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=28.5067873303167, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI48994930, Length=126, Percent_Identity=41.2698412698413, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788646, Length=209, Percent_Identity=25.3588516746411, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=26.027397260274, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23931; Mature: 23800
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFAILTNNIDMYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEF CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRNIPLVLIAFIFYFALPVVGITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEA HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTK HHHCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEEEECCCCEECCCEECCH TFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLAKEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDFAILTNNIDMYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEF CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRNIPLVLIAFIFYFALPVVGITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVAKGQMEA HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTK HHHCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEEEECCCCEECCCEECCH TFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLAKEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]