Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is bdbD [H]
Identifier: 118476232
GI number: 118476232
Start: 552007
End: 552663
Strand: Direct
Name: bdbD [H]
Synonym: BALH_0483
Alternate gene names: 118476232
Gene position: 552007-552663 (Clockwise)
Preceding gene: 118476231
Following gene: 118476233
Centisome position: 10.5
GC content: 33.03
Gene sequence:
>657_bases ATGTATATGAAATCAAACAAACTCATGGCTCTTGGTATAGTTTTTTCTATCGCAGTATTGATTGTAATCGGAACAATTGC GTATAGCATCATAAATGACAAAAAAGATAAAGGGAATGAGATGTTTGCTTATTCCACACAACAATCTTTAGGGAAAGATG ATGCACCAGTTAAGGTAGTTGAATTTGGAGACTTCAAATGTCCTGCTTGTCGTACTTGGGATGTAACAGTATTACCACGA TTAAAAGAAGAGTATATTGATAAAGGTAAAGTGCAGTTATATTTTATTAACTTCCCGTTTATTGGAAAAGACTCTGATTT AGGTGCAGCAGCAGGTGAAGCAATTTATAAACAAGATCAAGATTCATTCTGGACTTTCTATGATGAGATTTATCAAAGTC AAAAGAAAGACACGGAAGAATGGATTACAGAAGAATTACTTCTTAACATTGTGAAAGAGAAGCTTCCGAAAGTTGATGTA GAACAATTTAAGAAAGATTTACACAGTAAAGAAATAAAAGAAAAAGTACGTAAAGATTCAGATCGTGCTCAAAAATTAAA AGTTCAAGGTGCTCCTTCAGTATACATAAACGGAAATCTTGCAAACCCTGATTTCGATAGTATGAAGAAGGCGATTGATA AAGAATTGAAAAAGTGA
Upstream 100 bases:
>100_bases TTGTAATTTATGTGAGCGTGTTCATTGCGTGACGCATATAAGTGTTGATATTATGTGTATTGTGTACAATGCTGTATACA GAATATGAATTTAAAGAGGA
Downstream 100 bases:
>100_bases TGAGCTACTCATCACTTTTTCGACTTTTTTCGATAAAATTCTTGCTTCCGTTTTTTGTACATGCTATACTACTTTACATA AGTTATTCTAATATCTTATA
Product: thiol-disulfide oxidoreductase
Products: NA
Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MYMKSNKLMALGIVFSIAVLIVIGTIAYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPR LKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWTFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVDV EQFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYINGNLANPDFDSMKKAIDKELKK
Sequences:
>Translated_218_residues MYMKSNKLMALGIVFSIAVLIVIGTIAYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPR LKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWTFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVDV EQFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYINGNLANPDFDSMKKAIDKELKK >Mature_218_residues MYMKSNKLMALGIVFSIAVLIVIGTIAYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVVEFGDFKCPACRTWDVTVLPR LKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQDSFWTFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVDV EQFKKDLHSKEIKEKVRKDSDRAQKLKVQGAPSVYINGNLANPDFDSMKKAIDKELKK
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioredoxin family. DsbA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 24971; Mature: 24971
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMKSNKLMALGIVFSIAVLIVIGTIAYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCEEEE EFGDFKCPACRTWDVTVLPRLKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQ EECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCC DSFWTFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVDVEQFKKDLHSKEIKEKVRKDS CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DRAQKLKVQGAPSVYINGNLANPDFDSMKKAIDKELKK HHHHEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYMKSNKLMALGIVFSIAVLIVIGTIAYSIINDKKDKGNEMFAYSTQQSLGKDDAPVKVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCCCEEEE EFGDFKCPACRTWDVTVLPRLKEEYIDKGKVQLYFINFPFIGKDSDLGAAAGEAIYKQDQ EECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCC DSFWTFYDEIYQSQKKDTEEWITEELLLNIVKEKLPKVDVEQFKKDLHSKEIKEKVRKDS CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC DRAQKLKVQGAPSVYINGNLANPDFDSMKKAIDKELKK HHHHEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]