Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is 118476227
Identifier: 118476227
GI number: 118476227
Start: 545904
End: 546731
Strand: Direct
Name: 118476227
Synonym: BALH_0478
Alternate gene names: NA
Gene position: 545904-546731 (Clockwise)
Preceding gene: 118476226
Following gene: 118476228
Centisome position: 10.38
GC content: 27.05
Gene sequence:
>828_bases TTGTTTATGATGAAATTTGAAGATCATACAAAGAAATATATATTGTCCAGAACATACGATTGTAATACAAGAATAATTCC TATGCAATTATTCGGATTTTCAAGGGGGGCAAAACCTATCAATTTTATGGAAATAAAAAAGAAACATTATTGTATTAAAA GTATCCCTCTTCATATAGATAAAACTATGATTGAACAAGAATTCTATCAAGTCTTTAATAATAGAAAATCTGTCGAAGAA TTAGAAATTCGAACTAGAATTAGTTTTGAAAAACTATCAAATTTGCTACATTTTTCATATGGATATGTTAATAAAGAGCA TAATGTAGCTCCATCTGCAGGGGCAAAATATCCTATAAGTATATATATAGTGATTTTTAATGTCGAAAATTTAGAACAAG GTATATATTATTATAATAAAGAGCAAGACACCTTAGAGTTGATAAGAAAAGGGGAATATAGAGATGCTATTAATAATCTC TATATTGATAATAATCATATTCATTCTTCATCTTTTATTATGTTTCATGTTGCGGATCTTAATAAAACAAGTAATAAATA TGAGGATAGAGGATATAAATTAATACATTTAGATATGGGACATCTTTCCCAAAATCTTTATCTATTAAGCAGTGCGCAAC AATTAGGCATTAGAGCAATTTTCGGTTTATATGAAAATAAAGTGAATGAATTTTTAGAAATTGATGGAGAAAATGAGTTT GTGTTGCTTTCACATGTTTTTGGAGGAATAAAGTATCCTACGCCAGTAACTATGGATACAAAATTCAGCGATATATATTA TGAAAATGAGGAAATAGAAAGTGAATAA
Upstream 100 bases:
>100_bases AGGTTATTAGATGCTCCGAAAAACATGGGATATGCACCAGCAAAAGCTTTTAATAAGAATCCACATCCATTTCCGTAAAG AATGCATAAATAGGAGGTAA
Downstream 100 bases:
>100_bases TAAATTTCTATTGAAGTTTCTGATAAATCTGTATGGAATGCAAAAATATAAACTAATTTTATTGTTTTTATTTTCCTGTT TTCTAACTGTATATGAAATT
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MFMMKFEDHTKKYILSRTYDCNTRIIPMQLFGFSRGAKPINFMEIKKKHYCIKSIPLHIDKTMIEQEFYQVFNNRKSVEE LEIRTRISFEKLSNLLHFSYGYVNKEHNVAPSAGAKYPISIYIVIFNVENLEQGIYYYNKEQDTLELIRKGEYRDAINNL YIDNNHIHSSSFIMFHVADLNKTSNKYEDRGYKLIHLDMGHLSQNLYLLSSAQQLGIRAIFGLYENKVNEFLEIDGENEF VLLSHVFGGIKYPTPVTMDTKFSDIYYENEEIESE
Sequences:
>Translated_275_residues MFMMKFEDHTKKYILSRTYDCNTRIIPMQLFGFSRGAKPINFMEIKKKHYCIKSIPLHIDKTMIEQEFYQVFNNRKSVEE LEIRTRISFEKLSNLLHFSYGYVNKEHNVAPSAGAKYPISIYIVIFNVENLEQGIYYYNKEQDTLELIRKGEYRDAINNL YIDNNHIHSSSFIMFHVADLNKTSNKYEDRGYKLIHLDMGHLSQNLYLLSSAQQLGIRAIFGLYENKVNEFLEIDGENEF VLLSHVFGGIKYPTPVTMDTKFSDIYYENEEIESE >Mature_275_residues MFMMKFEDHTKKYILSRTYDCNTRIIPMQLFGFSRGAKPINFMEIKKKHYCIKSIPLHIDKTMIEQEFYQVFNNRKSVEE LEIRTRISFEKLSNLLHFSYGYVNKEHNVAPSAGAKYPISIYIVIFNVENLEQGIYYYNKEQDTLELIRKGEYRDAINNL YIDNNHIHSSSFIMFHVADLNKTSNKYEDRGYKLIHLDMGHLSQNLYLLSSAQQLGIRAIFGLYENKVNEFLEIDGENEF VLLSHVFGGIKYPTPVTMDTKFSDIYYENEEIESE
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 32480; Mature: 32480
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMMKFEDHTKKYILSRTYDCNTRIIPMQLFGFSRGAKPINFMEIKKKHYCIKSIPLHID CEEEEECCCHHHHHHEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHEEECCCCHHH KTMIEQEFYQVFNNRKSVEELEIRTRISFEKLSNLLHFSYGYVNKEHNVAPSAGAKYPIS HHHHHHHHHHHHCCCCCHHHHHHHHEECHHHHHHHHHHHHCEECCCCCCCCCCCCCCCEE IYIVIFNVENLEQGIYYYNKEQDTLELIRKGEYRDAINNLYIDNNHIHSSSFIMFHVADL EEEEEEEECCCCCCCEEECCCHHHHHHHHCCCHHHHHHHEEECCCEEECCCEEEEEEECC NKTSNKYEDRGYKLIHLDMGHLSQNLYLLSSAQQLGIRAIFGLYENKVNEFLEIDGENEF CCCCCCHHCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEECCCCCE VLLSHVFGGIKYPTPVTMDTKFSDIYYENEEIESE EEEEHHHCCCCCCCCEEECCCCHHEEECCCCCCCC >Mature Secondary Structure MFMMKFEDHTKKYILSRTYDCNTRIIPMQLFGFSRGAKPINFMEIKKKHYCIKSIPLHID CEEEEECCCHHHHHHEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHEEECCCCHHH KTMIEQEFYQVFNNRKSVEELEIRTRISFEKLSNLLHFSYGYVNKEHNVAPSAGAKYPIS HHHHHHHHHHHHCCCCCHHHHHHHHEECHHHHHHHHHHHHCEECCCCCCCCCCCCCCCEE IYIVIFNVENLEQGIYYYNKEQDTLELIRKGEYRDAINNLYIDNNHIHSSSFIMFHVADL EEEEEEEECCCCCCCEEECCCHHHHHHHHCCCHHHHHHHEEECCCEEECCCEEEEEEECC NKTSNKYEDRGYKLIHLDMGHLSQNLYLLSSAQQLGIRAIFGLYENKVNEFLEIDGENEF CCCCCCHHCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEECCCCCE VLLSHVFGGIKYPTPVTMDTKFSDIYYENEEIESE EEEEHHHCCCCCCCCEEECCCCHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]