Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is 118476218
Identifier: 118476218
GI number: 118476218
Start: 531001
End: 531807
Strand: Direct
Name: 118476218
Synonym: BALH_0467
Alternate gene names: NA
Gene position: 531001-531807 (Clockwise)
Preceding gene: 118476217
Following gene: 118476219
Centisome position: 10.1
GC content: 36.06
Gene sequence:
>807_bases TTGTACAAGGGGGATGATGAGATGATATATATAAAACTATTTTTGCAATATGCAAGCCAATATATAAAAACAAAATTGGA GTATCGGGGCGATTTTATCGTGGGGTTACTTTCTGATTTATCACTACAGGCTGTTAATTTAATTTTTATTCTTGTTGTGT TTGGACATACACAAGCATTAAAAGGCTGGAGTAGAGAAGAAGTAATCTTTATTTATGGTTTCTTTTTAGTACCGTTTGCC ATTTTCTCAGCTTTCTTTAACATATGGGACTTTAATGATCGTTACATCATTAAAGGAGAAATGGATCGTATATTAACGAG ACCAATTCATAGCTTGTTTCAAATTATATTAGAAAGAATGGAACTGGAGTCTTTAATTGGGGCCATTACAGGAATGATTG TAATGGGGTATGCAGCTGTGGAGTTGCAACTATCTTTTTACTGGTATGATTTATTCTTATTCTTACTAATGGTAGGAGGA GGCGCACTTGTGTACGGAGGAATATTTGTTACGCTTGCAAGCCTTGGTTTTTGGTCGGATGCGAAAAGTTCAATTATGCC GCTAATGTATAACATAGGTAATTATGGCCGCTATCCGGTTAATATTTATAACCGTGTGATTCGCTTCATTTTAACATTTG TTTTACCATTTGCGTTTGTCGGAGTGTATCCAGCAGCGTACTTTTTAAGAAAAACAGAGTGGAATAATTATGCATTTGCA ACACCGCTCGTTGGTGTGATCTGTTTTACAATTGCAATCACTCTTTGGAACCAAGGGGTAAAAAGGTACCGTGGTGCTGG CAATTAA
Upstream 100 bases:
>100_bases GGAAGTAAATTGTATGAGGCATTATTATTCCAAGTAATTTGGGCAATTGTACTTATTATTCCAATTGTACTCATGTGGAG AACGGCGAGAAAACGTCTAA
Downstream 100 bases:
>100_bases TTATAAAAGCTCGTTTGTTTCTAAGGGATAAATTTAATGGTCACCTCATACATATAAAATGAGGTGGAGGACATGTTATG GGGATTTATTCTATTAATTG
Product: ABC transporter permease
Products: NA
Alternate protein names: Integral Membrane Transporter; ABC-Type Transport System Permease Component; ABC Transporter Permease Protein; ABC Transporter Transmembrane Subunit; ABC Transporter Transmembrane Component; Permease Component; ABC Transporter; ABC-Type Transport System Permease Component-Like
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MYKGDDEMIYIKLFLQYASQYIKTKLEYRGDFIVGLLSDLSLQAVNLIFILVVFGHTQALKGWSREEVIFIYGFFLVPFA IFSAFFNIWDFNDRYIIKGEMDRILTRPIHSLFQIILERMELESLIGAITGMIVMGYAAVELQLSFYWYDLFLFLLMVGG GALVYGGIFVTLASLGFWSDAKSSIMPLMYNIGNYGRYPVNIYNRVIRFILTFVLPFAFVGVYPAAYFLRKTEWNNYAFA TPLVGVICFTIAITLWNQGVKRYRGAGN
Sequences:
>Translated_268_residues MYKGDDEMIYIKLFLQYASQYIKTKLEYRGDFIVGLLSDLSLQAVNLIFILVVFGHTQALKGWSREEVIFIYGFFLVPFA IFSAFFNIWDFNDRYIIKGEMDRILTRPIHSLFQIILERMELESLIGAITGMIVMGYAAVELQLSFYWYDLFLFLLMVGG GALVYGGIFVTLASLGFWSDAKSSIMPLMYNIGNYGRYPVNIYNRVIRFILTFVLPFAFVGVYPAAYFLRKTEWNNYAFA TPLVGVICFTIAITLWNQGVKRYRGAGN >Mature_268_residues MYKGDDEMIYIKLFLQYASQYIKTKLEYRGDFIVGLLSDLSLQAVNLIFILVVFGHTQALKGWSREEVIFIYGFFLVPFA IFSAFFNIWDFNDRYIIKGEMDRILTRPIHSLFQIILERMELESLIGAITGMIVMGYAAVELQLSFYWYDLFLFLLMVGG GALVYGGIFVTLASLGFWSDAKSSIMPLMYNIGNYGRYPVNIYNRVIRFILTFVLPFAFVGVYPAAYFLRKTEWNNYAFA TPLVGVICFTIAITLWNQGVKRYRGAGN
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30868; Mature: 30868
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKGDDEMIYIKLFLQYASQYIKTKLEYRGDFIVGLLSDLSLQAVNLIFILVVFGHTQAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KGWSREEVIFIYGFFLVPFAIFSAFFNIWDFNDRYIIKGEMDRILTRPIHSLFQIILERM CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH ELESLIGAITGMIVMGYAAVELQLSFYWYDLFLFLLMVGGGALVYGGIFVTLASLGFWSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC AKSSIMPLMYNIGNYGRYPVNIYNRVIRFILTFVLPFAFVGVYPAAYFLRKTEWNNYAFA CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH TPLVGVICFTIAITLWNQGVKRYRGAGN HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYKGDDEMIYIKLFLQYASQYIKTKLEYRGDFIVGLLSDLSLQAVNLIFILVVFGHTQAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KGWSREEVIFIYGFFLVPFAIFSAFFNIWDFNDRYIIKGEMDRILTRPIHSLFQIILERM CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH ELESLIGAITGMIVMGYAAVELQLSFYWYDLFLFLLMVGGGALVYGGIFVTLASLGFWSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC AKSSIMPLMYNIGNYGRYPVNIYNRVIRFILTFVLPFAFVGVYPAAYFLRKTEWNNYAFA CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH TPLVGVICFTIAITLWNQGVKRYRGAGN HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA