Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is 118476126
Identifier: 118476126
GI number: 118476126
Start: 425618
End: 426421
Strand: Direct
Name: 118476126
Synonym: BALH_0371
Alternate gene names: NA
Gene position: 425618-426421 (Clockwise)
Preceding gene: 118476125
Following gene: 118476127
Centisome position: 8.1
GC content: 33.21
Gene sequence:
>804_bases GTGCGTAATAATATGAAATTGCTAACTTTAAACTGTCACTCTTGGCAAGAAGAAAATCAAATAGAAAAGATAAAATATCT TGCTAAAGTCATTCAAGAAGAAGAGTACGATGTCATCGCATTGCAAGAAGTAAGTCAGTCGATAGGGGCTAAAAATGTAT GCGGTAACAAGAAAGAAGATAATTTTGGACTTTTACTATTAGAAGAGTTAAAAGCGTTACATGTAAAAGATTACAATATT ACTTGGGATTTCTCTCATATTGGTTATGATGTGTATGAAGAAGGATTAGCGATTATAACAAAGCATAATGTTGTAAAAGA AGATGCGTTCTTTATTTCAGAAAATAAGGATACAACGTATTGGAAAACACGCAAAATTGTAAGTGCAACAATTGCTTATA ATGGTAAGAACATCACGTTTTACTCTTGCCACCTCGGTTGGTGGAATGATGAAGAAGAATCATTTAAAGATCAAGTGAAT CGTTTGATGGAGCGTGTAGATAGCAATGAACTTTCCTTCTTAATGGGTGATTTTAATAATAACGCTCGTTTGCAAGGAGA GGGTTATGAATATATGATGCAAGAAGGTTTGTACGACACATATGAATTAGCAATAGAGAAGGATGAAGGAACAACTGTCC AAGGTGAGATTGCTGGTTGGGATGAAAATAAACATAATTTACGAATCGATCTAATATTGTGTAACCGAAGTGAAAAAATT CGTTCTTCAAAAGTCGTTTTTAATGGTACAAACCGAAAAGTAATTTCAGATCATTTCGGTGTAGAAGTACAAGTAGATAT ATAA
Upstream 100 bases:
>100_bases CAAAATGGTGCTTTAGGACTTATCGTAAAAGATAAAGGTGTACAAGCAGTATATGGTCCGAAAGCTGACGTATTAAAGTC AGACATTCAAGATATGTTAG
Downstream 100 bases:
>100_bases TAGAAGAAATCCTCACAGATGATGAAAAGCTGTGAGGATTTTTTTGAGGAATACAAGTATTTCCAAGAGAAAATACTTGT ATTTTTTATGACATTTCCTA
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; RgfB Protein; Exodeoxyribonuclease III; LOW QUALITY PROTEIN Metal-Dependent Hydrolase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRNNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNI TWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVN RLMERVDSNELSFLMGDFNNNARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKI RSSKVVFNGTNRKVISDHFGVEVQVDI
Sequences:
>Translated_267_residues MRNNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNI TWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVN RLMERVDSNELSFLMGDFNNNARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKI RSSKVVFNGTNRKVISDHFGVEVQVDI >Mature_267_residues MRNNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNI TWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVN RLMERVDSNELSFLMGDFNNNARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKI RSSKVVFNGTNRKVISDHFGVEVQVDI
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31093; Mature: 31093
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKED CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCCC NFGLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTY CCCEEEEHHHHHEEEECCEEEEEHHHCCHHHHHCCEEEEEECCEEECCEEEEECCCCCCE WKTRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNN EEHHEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC NARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKI CCEEECCCHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCC RSSKVVFNGTNRKVISDHFGVEVQVDI CCCEEEEECCCCEEEECCCCEEEEEEC >Mature Secondary Structure MRNNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKED CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCCCCCCC NFGLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTY CCCEEEEHHHHHEEEECCEEEEEHHHCCHHHHHCCEEEEEECCEEECCEEEEECCCCCCE WKTRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNN EEHHEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC NARLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWDENKHNLRIDLILCNRSEKI CCEEECCCHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCC RSSKVVFNGTNRKVISDHFGVEVQVDI CCCEEEEECCCCEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA