Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is yugT [H]
Identifier: 118476124
GI number: 118476124
Start: 422021
End: 423781
Strand: Direct
Name: yugT [H]
Synonym: BALH_0369
Alternate gene names: 118476124
Gene position: 422021-423781 (Clockwise)
Preceding gene: 118476123
Following gene: 118476125
Centisome position: 8.03
GC content: 34.36
Gene sequence:
>1761_bases ATGAAAACAGTTGCAAACTATTCATATTTTGTTATGATAGTGTTACGAAAACGTTTGCATAAAATTTCCGATGGGATGCA AAAGGAGAGAATGACTATGAATAAGACATGGTGGAAAGAAGCGGTTGCTTATCAAATTTATCCACGTAGCTTTATGGATT CAAATGGTGATGGTATTGGAGATTTACAAGGTATTATTGCGAAACTGGATTATTTAAAAGATTTAGGAATAGATGTAATT TGGATTTGTCCAATGTATAAGTCACCTAATGATGATAATGGTTATGACATTAGTGATTATCAAGATATTATGGATGAGTT TGGGACGATGGAAGACTTTGATGCTTTACTAGATGAAGTTCATAAACGTGATATGAAGCTTATTATTGATTTAGTTATTA ATCATACAAGTGATGAACATCCATGGTTTATTGAGTCTCGTTCATCTAAAGACAATCCGAAGCGTGATTGGTATATTTGG CATGATGGTAAAGATGGTGCAGAACCAAACAACTGGGAAAGTATTTTTAATGGTTCGGCATGGGAGTATGATGAAGTAAC AGGACAATATTATTTACACTTATTCTCGCGTAAACAACCAGATTTAAACTGGGAGAATAAAGAAGTTCGAGAAGTGCTAT ACGATACAGTTAATTGGTGGCTTGATAAAGGAATTGATGGTTTCCGAGTAGATGCAATCAGCCATATTAAAAAAGAAGAT GGCTTTAAAGATATGCCAAATCCAAAAGGACTAAAGTATGTTCCATCTTTTGATAAACATATGAATGTGGATGGTATTCA ACCTTTATTAGAAGAATTAAAAGAAAATACGTTTTCTAAGTACGATATTATGACTGTTGGTGAAGCGAATGGCGTTAAGA TTGAAGATGCTGAGCTTTGGGTTGGAGAAGAGCAAGGTAAGTTCAATATGGTATTCCAATTCGAACATTTAAGTTTATGG GATGCAGAAAAGAAGAAAGATCTTGATGTTGTAGGGCTGAAAAAGGTATTAACGAAATGGCAAAAAGGGTTAGAAAATAA AGGATGGAATGCTTTATATATTGAGAATCACGATAAGCCGCGTATCGTTTCAACTTGGGGAGATGATAAACAATATTGGC GTGAAAGTGCGACAGCTTTAGGAGCAATGTATTTCTTTATGCACGGTACACCGTTTATTTATCAAGGACAAGAAATTGGG ATGACAAATGTTCAATTCCAAAACATTGAAGATTACGATGATGTAGCAATTAAAAATTTATATCGCGAGAAAATTGCAGA GGGCGTATCCCATCAAGATATGATGGAAATTATATGGGCTTCTTGCCGCGATAATTCACGTACGCCTATGCATTGGGACG ATGAGATAAATGCTGGTTTCACAACAGGTACGCCTTGGTTTGGTATGAATCAAAACTACAAAGAAATCAATGTTGCAAAG CAAAAGAATGAAGAGAACTCTATTTTCAATTTCTATAAGAAAATGATTGCCCTGAAAAAAGAGCATGATGTACTGAATTA TGGTACGTACGATTTACTTTTAGAAGATGACCCGCAAATTTATGCATATACTCGTACATTAAACGATGAAAAAATAGTCG TAATTAGTAATATCTCAAAAGAGGAAGCTGTGTATAATGAGGATTTATTTGCACTAGAACGCAAACGTTTGCTTTTAAAT AACTATGAAGTTGCGGAACATGAACAATTAACTACAATCACGTTAAAGCCTTATGAAACAAGGGTTTATCGCATTTCATA A
Upstream 100 bases:
>100_bases AAGCGTATGTAACGTGCGTGGTCAAGAGTAGGTGAGGAATGAGATTTGCCTTTGTGAGAAATAAATAAAGCATAAGAATA AAGAAACTACATAGAGTTCA
Downstream 100 bases:
>100_bases TAAAAAAGGATGCTCTTAGAGCATCTTTTTTTTTATAAAAAAAATAAATTTCTATTGCAAAGTGAAAACGCTTTTATTAA AATAGATTTATGAAAACGGT
Product: alpha-glucosidase
Products: NA
Alternate protein names: Oligosaccharide alpha-1,6-glucosidase 3; Sucrase-isomaltase 3; Isomaltase 3 [H]
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MKTVANYSYFVMIVLRKRLHKISDGMQKERMTMNKTWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVI WICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEVHKRDMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIW HDGKDGAEPNNWESIFNGSAWEYDEVTGQYYLHLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKED GFKDMPNPKGLKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELWVGEEQGKFNMVFQFEHLSLW DAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKPRIVSTWGDDKQYWRESATALGAMYFFMHGTPFIYQGQEIG MTNVQFQNIEDYDDVAIKNLYREKIAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAK QKNEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISKEEAVYNEDLFALERKRLLLN NYEVAEHEQLTTITLKPYETRVYRIS
Sequences:
>Translated_586_residues MKTVANYSYFVMIVLRKRLHKISDGMQKERMTMNKTWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVI WICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEVHKRDMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIW HDGKDGAEPNNWESIFNGSAWEYDEVTGQYYLHLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKED GFKDMPNPKGLKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELWVGEEQGKFNMVFQFEHLSLW DAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKPRIVSTWGDDKQYWRESATALGAMYFFMHGTPFIYQGQEIG MTNVQFQNIEDYDDVAIKNLYREKIAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAK QKNEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISKEEAVYNEDLFALERKRLLLN NYEVAEHEQLTTITLKPYETRVYRIS >Mature_586_residues MKTVANYSYFVMIVLRKRLHKISDGMQKERMTMNKTWWKEAVAYQIYPRSFMDSNGDGIGDLQGIIAKLDYLKDLGIDVI WICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEVHKRDMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIW HDGKDGAEPNNWESIFNGSAWEYDEVTGQYYLHLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKED GFKDMPNPKGLKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELWVGEEQGKFNMVFQFEHLSLW DAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKPRIVSTWGDDKQYWRESATALGAMYFFMHGTPFIYQGQEIG MTNVQFQNIEDYDDVAIKNLYREKIAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAK QKNEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISKEEAVYNEDLFALERKRLLLN NYEVAEHEQLTTITLKPYETRVYRIS
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=533, Percent_Identity=32.0825515947467, Blast_Score=254, Evalue=2e-67, Organism=Escherichia coli, GI1790687, Length=559, Percent_Identity=40.0715563506261, Blast_Score=445, Evalue=1e-126, Organism=Escherichia coli, GI1786604, Length=416, Percent_Identity=22.8365384615385, Blast_Score=83, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32565753, Length=213, Percent_Identity=32.8638497652582, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI25147709, Length=495, Percent_Identity=24.6464646464646, Blast_Score=123, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322245, Length=583, Percent_Identity=38.9365351629503, Blast_Score=397, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6324416, Length=581, Percent_Identity=39.2426850258176, Blast_Score=374, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6319776, Length=587, Percent_Identity=39.1822827938671, Blast_Score=372, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6321726, Length=581, Percent_Identity=38.382099827883, Blast_Score=372, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6321731, Length=587, Percent_Identity=39.0119250425894, Blast_Score=371, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6322241, Length=581, Percent_Identity=39.0705679862306, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6322021, Length=581, Percent_Identity=39.0705679862306, Blast_Score=370, Evalue=1e-103, Organism=Drosophila melanogaster, GI24583747, Length=547, Percent_Identity=34.1864716636197, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI24583749, Length=547, Percent_Identity=34.1864716636197, Blast_Score=297, Evalue=1e-80, Organism=Drosophila melanogaster, GI24583745, Length=592, Percent_Identity=32.7702702702703, Blast_Score=295, Evalue=9e-80, Organism=Drosophila melanogaster, GI221330053, Length=586, Percent_Identity=32.7645051194539, Blast_Score=293, Evalue=3e-79, Organism=Drosophila melanogaster, GI24586599, Length=593, Percent_Identity=31.0286677908938, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI24586593, Length=537, Percent_Identity=33.3333333333333, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI24586597, Length=507, Percent_Identity=34.1222879684418, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24586591, Length=496, Percent_Identity=34.6774193548387, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24586589, Length=576, Percent_Identity=32.1180555555556, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24586587, Length=536, Percent_Identity=33.2089552238806, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI45549022, Length=569, Percent_Identity=30.5799648506151, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI281360393, Length=482, Percent_Identity=30.2904564315353, Blast_Score=196, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =3.2.1.10 [H]
Molecular weight: Translated: 69016; Mature: 69016
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVANYSYFVMIVLRKRLHKISDGMQKERMTMNKTWWKEAVAYQIYPRSFMDSNGDGIG CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCCCH DLQGIIAKLDYLKDLGIDVIWICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEV HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH HKRDMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIWHDGKDGAEPNNWESIFNGSA HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCC WEYDEVTGQYYLHLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKED CCHHHHCHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHC GFKDMPNPKGLKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELW CCCCCCCCCCCEECCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCEEE VGEEQGKFNMVFQFEHLSLWDAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKP ECCCCCCEEEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC RIVSTWGDDKQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFQNIEDYDDVAIKNL EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHH YREKIAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAK HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QKNEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISK HCCCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCH EEAVYNEDLFALERKRLLLNNYEVAEHEQLTTITLKPYETRVYRIS HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEC >Mature Secondary Structure MKTVANYSYFVMIVLRKRLHKISDGMQKERMTMNKTWWKEAVAYQIYPRSFMDSNGDGIG CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCCCH DLQGIIAKLDYLKDLGIDVIWICPMYKSPNDDNGYDISDYQDIMDEFGTMEDFDALLDEV HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH HKRDMKLIIDLVINHTSDEHPWFIESRSSKDNPKRDWYIWHDGKDGAEPNNWESIFNGSA HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCC WEYDEVTGQYYLHLFSRKQPDLNWENKEVREVLYDTVNWWLDKGIDGFRVDAISHIKKED CCHHHHCHHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHC GFKDMPNPKGLKYVPSFDKHMNVDGIQPLLEELKENTFSKYDIMTVGEANGVKIEDAELW CCCCCCCCCCCEECCCCHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCEEE VGEEQGKFNMVFQFEHLSLWDAEKKKDLDVVGLKKVLTKWQKGLENKGWNALYIENHDKP ECCCCCCEEEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC RIVSTWGDDKQYWRESATALGAMYFFMHGTPFIYQGQEIGMTNVQFQNIEDYDDVAIKNL EEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHH YREKIAEGVSHQDMMEIIWASCRDNSRTPMHWDDEINAGFTTGTPWFGMNQNYKEINVAK HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH QKNEENSIFNFYKKMIALKKEHDVLNYGTYDLLLEDDPQIYAYTRTLNDEKIVVISNISK HCCCCHHHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCH EEAVYNEDLFALERKRLLLNNYEVAEHEQLTTITLKPYETRVYRIS HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]