Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yerH [H]
Identifier: 118476056
GI number: 118476056
Start: 344903
End: 346096
Strand: Direct
Name: yerH [H]
Synonym: BALH_0299
Alternate gene names: 118476056
Gene position: 344903-346096 (Clockwise)
Preceding gene: 118476055
Following gene: 118476057
Centisome position: 6.56
GC content: 36.18
Gene sequence:
>1194_bases ATGAAAAAAATAGCATTAGCGGTATTAAGCCTTGGCCTACTTGTAAGTGGGTGTAGTGCAGGTGCCGATAAAGATGAAAA AGTGGTTGAGAAATCGGGGAAAGCAAAAGAGCAAGTAATCGTCCCAAATTACTCTATTTCGGATGAATATTATAAGACGA CTATTCCATTTGAAGGAGGAAATGCACGTGGCTTAGTTGTGCAAGGAGTAAGTAATCGTCTTGATATAGATGAATTTGAA ACAGGATTAATGCGTATTGCGAAAGAATCATTTAGTACGAAAGATAATGTTTTAAAAGGCGGAAAGTCCCTAACTACTCA GTATATACAGATGCTTGTTAAAAGAAAACGTACAGATGCAGAACAAAAGGAACTAGAAGATACATTAAAAAAAGATGCGG TTAAATTCCCGAACATAGGGTTAAATCCCGCATTAGGTGCAGGATCCGAATCATTAGAGGCGAAAAATAAAAAAAATCCA ATATATATTTCCAATATTTTAGAACATGATTATTATGTGAACAAAGACAAAAAAGATGAGCGTAGTGGCATTGTAGTTGG ATTAGCGATGAATTCGGTTCATTATTATGAGGAAGAGCATGGGTATCCGCGTGAGGTTACAATTTCGAATGAAAAGATGT TAGCTGAAGGGAAAAAAATGGTGCCAGAAATCTTGAAAGTTATGCATCAACAAGATCCTGAGACAAAAAACCTTCCGATA ACATTTGCGATTTATCGTCAGGCTCCAAAGTCTTCGCTCGTACCAGGTAACTTTGTTTCTTATGGGAATGTCGAAAAAGG TAGTGAAACGGTTGAGGATTGGAAACAAATTAATGAGAAATATTATTTGTTCCCATCTGAACAAGCGAAAACAGATAATA AACGTGAAGACTTGGCGAGAGTATCAAACTTCAAGGCAAAATTAAGCGATTATTTCCAAGGTGACTATACAGCTGTTATC GGTACTGGTATGTATAGAGACGATGAATTAAGAGAAATAAAGCTTGATATTCCTGTCCAGTTTAATGGGAAAGCAGAAAT AATTGGCTTTACACAATATGTAGCCGGGCTTGTTATGGAATACTTCCCGAATTATATGAAAGTACAAGTAACGATTAAAT CTGTAGAACGTCCAGAAGCGATTATTATACGTGAAGCGAAGCAAGATGAACCGTATGTGAAAATTTTAGATTAA
Upstream 100 bases:
>100_bases GCAGGTTCGAAATTAGCACAAGCGGAGAAACATAATGTTGAGGTTTGGAATGAAGAGAGGTTCTTACAAGAGCTAAATAA GTAAGAGGTGCAAACTTACC
Downstream 100 bases:
>100_bases GTAGAAGGGTCGTTCCTTTATGGAACGGCTTTTTTTCTTGGGTAATTTTGTTATAATTTAAAATGTTATAAATAATGGGA TAAGGGGTAAAGGGCATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGGNARGLVVQGVSNRLDIDEFE TGLMRIAKESFSTKDNVLKGGKSLTTQYIQMLVKRKRTDAEQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNP IYISNILEHDYYVNKDKKDERSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGKKMVPEILKVMHQQDPETKNLPI TFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQINEKYYLFPSEQAKTDNKREDLARVSNFKAKLSDYFQGDYTAVI GTGMYRDDELREIKLDIPVQFNGKAEIIGFTQYVAGLVMEYFPNYMKVQVTIKSVERPEAIIIREAKQDEPYVKILD
Sequences:
>Translated_397_residues MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGGNARGLVVQGVSNRLDIDEFE TGLMRIAKESFSTKDNVLKGGKSLTTQYIQMLVKRKRTDAEQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNP IYISNILEHDYYVNKDKKDERSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGKKMVPEILKVMHQQDPETKNLPI TFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQINEKYYLFPSEQAKTDNKREDLARVSNFKAKLSDYFQGDYTAVI GTGMYRDDELREIKLDIPVQFNGKAEIIGFTQYVAGLVMEYFPNYMKVQVTIKSVERPEAIIIREAKQDEPYVKILD >Mature_397_residues MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGGNARGLVVQGVSNRLDIDEFE TGLMRIAKESFSTKDNVLKGGKSLTTQYIQMLVKRKRTDAEQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNP IYISNILEHDYYVNKDKKDERSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGKKMVPEILKVMHQQDPETKNLPI TFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQINEKYYLFPSEQAKTDNKREDLARVSNFKAKLSDYFQGDYTAVI GTGMYRDDELREIKLDIPVQFNGKAEIIGFTQYVAGLVMEYFPNYMKVQVTIKSVERPEAIIIREAKQDEPYVKILD
Specific function: Unknown
COG id: COG4851
COG function: function code R; Protein involved in sex pheromone biosynthesis
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011426 [H]
Pfam domain/function: PF07537 CamS [H]
EC number: NA
Molecular weight: Translated: 44806; Mature: 44806
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGG CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCC NARGLVVQGVSNRLDIDEFETGLMRIAKESFSTKDNVLKGGKSLTTQYIQMLVKRKRTDA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCH EQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNPIYISNILEHDYYVNKDKKDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCC RSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGKKMVPEILKVMHQQDPETKNLPI CCCEEEEEEECCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQINEKYYLFPSEQAKTDNKREDLAR EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCHHCCCCCHHHHHHH VSNFKAKLSDYFQGDYTAVIGTGMYRDDELREIKLDIPVQFNGKAEIIGFTQYVAGLVME HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEECCCEEEEEHHHHHHHHHHH YFPNYMKVQVTIKSVERPEAIIIREAKQDEPYVKILD HCCCEEEEEEEEECCCCCCEEEEEECCCCCCEEEECC >Mature Secondary Structure MKKIALAVLSLGLLVSGCSAGADKDEKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGG CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCC NARGLVVQGVSNRLDIDEFETGLMRIAKESFSTKDNVLKGGKSLTTQYIQMLVKRKRTDA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCH EQKELEDTLKKDAVKFPNIGLNPALGAGSESLEAKNKKNPIYISNILEHDYYVNKDKKDE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCC RSGIVVGLAMNSVHYYEEEHGYPREVTISNEKMLAEGKKMVPEILKVMHQQDPETKNLPI CCCEEEEEEECCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TFAIYRQAPKSSLVPGNFVSYGNVEKGSETVEDWKQINEKYYLFPSEQAKTDNKREDLAR EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCHHCCCCCHHHHHHH VSNFKAKLSDYFQGDYTAVIGTGMYRDDELREIKLDIPVQFNGKAEIIGFTQYVAGLVME HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEECCCEEEEEHHHHHHHHHHH YFPNYMKVQVTIKSVERPEAIIIREAKQDEPYVKILD HCCCEEEEEEEEECCCCCCEEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9701819; 9384377 [H]