| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yhjO [H]
Identifier: 118475992
GI number: 118475992
Start: 242313
End: 243608
Strand: Direct
Name: yhjO [H]
Synonym: BALH_0229
Alternate gene names: 118475992
Gene position: 242313-243608 (Clockwise)
Preceding gene: 118475991
Following gene: 118475993
Centisome position: 4.61
GC content: 37.73
Gene sequence:
>1296_bases TTGGCGAACAAAAGGGGTGGAATGATGAAGAATACGTGGCGTGAATTAAGGGAGATGGACCGTAACGTATGGATTCGGTT TATTGGTGAGACGTTAAATGGAATTGCGATGATGATGTTGATGCCTTTCTTTGCGTTATATTTAAAAGATAAGGTGGATT CATTATTACAGGTTGGAGTTATTATGGCGCTTTCTCCAATTGCTGCGAGCTTTGGATCCATTATAGGTGGAAGAATTGCT GATATATATGGACGAAAGCCGATTATGATATTTTCGATGACGAGTAATGCATTATTAATGCTCGGTTTTTTATTTATAGA AGGATTTATTCCCTATGCAATTTTATCGGTTTTTTTAGGGTTAAGTAATTCTTTATTTCATCCAGCTGCATCAGCGATGG TTGCGGATGTAACGGCGCCAGAAAAAAGAACAGAAGCATATGGTTTGTTGCGGATGGGGCATAATATAGGTGCTGCAATT GGCCCGATAATGGGGGCTTCAGTAGTTATGTTGTCGAAGAACCTTGTGTTTATTATTGCCTCGTCTACGATGTTATTCTA TGCATTACTTGTATTCGTTCTTATTCAAGAGACAATGCCAAAGAGTGCGAATAAGGAAGAGGATAACGAAAAGGAATCAG GAGTGGTGTGGAAAATTGTATTGCGAGATAAGGCACTTATGATTTATTTATTAGCAGGTATCATTATTTCGATGGGATTT TCTCAAACAGAAGGCATGTTGCCATTGCATTTTGATAATGAAATGAAAGATATTTTTGGAACTAACAATCCATACCCATA TTTAATGGCGTTAAACGGACTATTAGTTGTGTTGTTCCAATTTCAAATTTCAAAATGGGCCACAGATAAACCTGTCGGAA AGACGATGTTATATGGTGCATGTTTGTTCGGGATAGGTTTGTTTTTTATAGGCTGGTTACCGAAGTGGTTTGGAGGATTA GATACAAATGCTACAATTATTTTAATAATGTTACTGTTTGTGTATGCCATATATACATTAGGCGAGATGATTATGTCGCC TGTACAGATGACGTTTGTAGCGAATTTGGCCCCTGAGCATTTAAGAGGGACTTATATGGGGGCTGCAAGTTTGCAGTGGA TTACAGGAAATGCATTTGGTCCACTTCTTGGGGGGTTTTTATTAGATCGATTACTTGGTCACTTCCTATTTACAATTTTA GCTATAGGATGTGTAGTTGCAGGCGTTGTATATATTTCTTTAGATCGTTTCGTTGAACAAAGGCAAAAAGGCACACTAAC CAAACAATCTTCTTAA
Upstream 100 bases:
>100_bases TGCAGCAAATTTATAAGTAGAAAAATCCATCCTAATTCTGTTAGGGTGGATTTTTATTTTTGAAAATTTACATTTTTCTG AATGTATTATAAGATAATGG
Downstream 100 bases:
>100_bases TGATTAGATGACATACACAAAAAAGGGATTTCTACATATTTTAGGTACATAACTAGATTGGGTTGCAATTTTATCCCACT TTAATGGGCAGTAAGACCCC
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MANKRGGMMKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKVDSLLQVGVIMALSPIAASFGSIIGGRIA DIYGRKPIMIFSMTSNALLMLGFLFIEGFIPYAILSVFLGLSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAI GPIMGASVVMLSKNLVFIIASSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKALMIYLLAGIIISMGF SQTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQISKWATDKPVGKTMLYGACLFGIGLFFIGWLPKWFGGL DTNATIILIMLLFVYAIYTLGEMIMSPVQMTFVANLAPEHLRGTYMGAASLQWITGNAFGPLLGGFLLDRLLGHFLFTIL AIGCVVAGVVYISLDRFVEQRQKGTLTKQSS
Sequences:
>Translated_431_residues MANKRGGMMKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKVDSLLQVGVIMALSPIAASFGSIIGGRIA DIYGRKPIMIFSMTSNALLMLGFLFIEGFIPYAILSVFLGLSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAI GPIMGASVVMLSKNLVFIIASSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKALMIYLLAGIIISMGF SQTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQISKWATDKPVGKTMLYGACLFGIGLFFIGWLPKWFGGL DTNATIILIMLLFVYAIYTLGEMIMSPVQMTFVANLAPEHLRGTYMGAASLQWITGNAFGPLLGGFLLDRLLGHFLFTIL AIGCVVAGVVYISLDRFVEQRQKGTLTKQSS >Mature_430_residues ANKRGGMMKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKVDSLLQVGVIMALSPIAASFGSIIGGRIAD IYGRKPIMIFSMTSNALLMLGFLFIEGFIPYAILSVFLGLSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAIG PIMGASVVMLSKNLVFIIASSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKALMIYLLAGIIISMGFS QTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQISKWATDKPVGKTMLYGACLFGIGLFFIGWLPKWFGGLD TNATIILIMLLFVYAIYTLGEMIMSPVQMTFVANLAPEHLRGTYMGAASLQWITGNAFGPLLGGFLLDRLLGHFLFTILA IGCVVAGVVYISLDRFVEQRQKGTLTKQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787815, Length=378, Percent_Identity=26.7195767195767, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI87081828, Length=334, Percent_Identity=23.6526946107784, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47634; Mature: 47502
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKRGGMMKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKVDSLLQVGV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMALSPIAASFGSIIGGRIADIYGRKPIMIFSMTSNALLMLGFLFIEGFIPYAILSVFLG HHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAIGPIMGASVVMLSKNLVFIIA CCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCEEEEEE SSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKALMIYLLAGIIISMGF CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC SQTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQISKWATDKPVGKTMLYGA CCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH CLFGIGLFFIGWLPKWFGGLDTNATIILIMLLFVYAIYTLGEMIMSPVQMTFVANLAPEH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LRGTYMGAASLQWITGNAFGPLLGGFLLDRLLGHFLFTILAIGCVVAGVVYISLDRFVEQ HCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQKGTLTKQSS HHHCCCCCCCC >Mature Secondary Structure ANKRGGMMKNTWRELREMDRNVWIRFIGETLNGIAMMMLMPFFALYLKDKVDSLLQVGV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMALSPIAASFGSIIGGRIADIYGRKPIMIFSMTSNALLMLGFLFIEGFIPYAILSVFLG HHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LSNSLFHPAASAMVADVTAPEKRTEAYGLLRMGHNIGAAIGPIMGASVVMLSKNLVFIIA CCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCEEEEEE SSTMLFYALLVFVLIQETMPKSANKEEDNEKESGVVWKIVLRDKALMIYLLAGIIISMGF CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCC SQTEGMLPLHFDNEMKDIFGTNNPYPYLMALNGLLVVLFQFQISKWATDKPVGKTMLYGA CCCCCCCEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH CLFGIGLFFIGWLPKWFGGLDTNATIILIMLLFVYAIYTLGEMIMSPVQMTFVANLAPEH HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LRGTYMGAASLQWITGNAFGPLLGGFLLDRLLGHFLFTILAIGCVVAGVVYISLDRFVEQ HCCHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQKGTLTKQSS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]