| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920076
Identifier: 117920076
GI number: 117920076
Start: 1917254
End: 1917610
Strand: Direct
Name: 117920076
Synonym: Shewana3_1629
Alternate gene names: NA
Gene position: 1917254-1917610 (Clockwise)
Preceding gene: 117920075
Following gene: 117920077
Centisome position: 38.56
GC content: 42.3
Gene sequence:
>357_bases ATGGTCACAGATAAAGACGGTTACATGCATTTGATCCAGTATTTGACTGAGCATCTTGGCTTGTTCGAAACGCCTGATAC CCAAAATGTGTCCGATGATACTGTGATGGAGTTGTTTGAAGAGCAATTATCCGCACAGATTATTATGGTTTGCGGCCAAA ATCCTTCCCTCTCTTTTGCCGAACGAAACACCATTATCCGTGAGGTCGATGCGATTGTGTACGATCTTGAGGAAATCTTA GCCTCAGTGGCAAATCATAGAGCCACGCCAGAACAAACGCTGTTTATCACTGAGTTTTCAGGCCTTATCAAGAATTTATT CGATCAAGAAATTGCGAAAATCCAAGTCCATGTGTAA
Upstream 100 bases:
>100_bases GTGGCTGACGTGCAAATCTTTATATCGACCACTTAATAGGTGGGTTTGGTTTTTTCAGTGTCGCCTTTGGCGATAGATTT TGGTGTGTGAAGGGTAAAAA
Downstream 100 bases:
>100_bases TACCTTCGCCTAGGCTTAATCTTAGGATTAACCTTGTCTATGGGGTTAGTCCTATCCGTTCGTTAGTTATCCCCATCATT ACTTCACTTTTAGTTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHRATPEQTLFITEFSGLIKNLFDQEIAKIQVHV
Sequences:
>Translated_118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHRATPEQTLFITEFSGLIKNLFDQEIAKIQVHV >Mature_118_residues MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFAERNTIIREVDAIVYDLEEIL ASVANHRATPEQTLFITEFSGLIKNLFDQEIAKIQVHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13430; Mature: 13430
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHH ERNTIIREVDAIVYDLEEILASVANHRATPEQTLFITEFSGLIKNLFDQEIAKIQVHV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MVTDKDGYMHLIQYLTEHLGLFETPDTQNVSDDTVMELFEEQLSAQIIMVCGQNPSLSFA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCHH ERNTIIREVDAIVYDLEEILASVANHRATPEQTLFITEFSGLIKNLFDQEIAKIQVHV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA