Click here to switch to the map view.

The map label for this gene is yaiI [C]

Identifier: 117920074

GI number: 117920074

Start: 1915914

End: 1916366

Strand: Direct

Name: yaiI [C]

Synonym: Shewana3_1627

Alternate gene names: 117920074

Gene position: 1915914-1916366 (Clockwise)

Preceding gene: 117920073

Following gene: 117920075

Centisome position: 38.53

GC content: 51.66

Gene sequence:

>453_bases
GTGGGACAGTATAAGATTTGGGTCGATGCCGATGCCTGCCCAAACCCGATTAAGGAGATTTTATTTCGCGCGGCTGAGCG
TAAATCACTACCGTTAGTGCTGGTGGCGAACCAAATGCTTCGGGTGCCGCCGTCGCCCTATATCAGCCAAGTGCGTGTCG
GCTCAGGCTTTGATGTGGCAGATCAATACATTGTCAACCATGTTGAGCCAACGCATTTAGTGATCACCGCCGATATCCCG
TTAGCGGCGCAAGTGATTGAAAAGGGGGCGCTGGCGCTCAATCCCCGCGGCGAACTCTACACCACTGACAATATTCGCCA
AAAATTGACGATGCGCGATTTTATGGAAGATTTACGTTCATCGGGCGTACACACGGGTGGCCCAGATGCGTTATCGGCGG
CGGATAAACAGGCTTTTGCCAATAGTTTAGATAAGTGGTTGGTGCGAGTTTAA

Upstream 100 bases:

>100_bases
GGGCGGGGAGCACAGACTGCATGACCGCTTCCTCTACACTCGCCAAGCGGATGAATGGGTCATTGACCGTTTAGCACCTT
AATTGGCTAGGAGCGTAAGC

Downstream 100 bases:

>100_bases
CGATAGTTAACTGGTCGCTAATTAAGAAAAAGAGTATCTTTAGCGAGACTTAGGTGATCTTTGTCACAGATTGTCTGAGT
GATTTGGCGGTTACGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MGQYKIWVDADACPNPIKEILFRAAERKSLPLVLVANQMLRVPPSPYISQVRVGSGFDVADQYIVNHVEPTHLVITADIP
LAAQVIEKGALALNPRGELYTTDNIRQKLTMRDFMEDLRSSGVHTGGPDALSAADKQAFANSLDKWLVRV

Sequences:

>Translated_150_residues
MGQYKIWVDADACPNPIKEILFRAAERKSLPLVLVANQMLRVPPSPYISQVRVGSGFDVADQYIVNHVEPTHLVITADIP
LAAQVIEKGALALNPRGELYTTDNIRQKLTMRDFMEDLRSSGVHTGGPDALSAADKQAFANSLDKWLVRV
>Mature_149_residues
GQYKIWVDADACPNPIKEILFRAAERKSLPLVLVANQMLRVPPSPYISQVRVGSGFDVADQYIVNHVEPTHLVITADIPL
AAQVIEKGALALNPRGELYTTDNIRQKLTMRDFMEDLRSSGVHTGGPDALSAADKQAFANSLDKWLVRV

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family [H]

Homologues:

Organism=Escherichia coli, GI87081732, Length=145, Percent_Identity=68.9655172413793, Blast_Score=208, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003791 [H]

Pfam domain/function: PF02639 DUF188 [H]

EC number: NA

Molecular weight: Translated: 16568; Mature: 16437

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQYKIWVDADACPNPIKEILFRAAERKSLPLVLVANQMLRVPPSPYISQVRVGSGFDVA
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCHHHEECCCCCCHH
DQYIVNHVEPTHLVITADIPLAAQVIEKGALALNPRGELYTTDNIRQKLTMRDFMEDLRS
HHHHHHCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHH
SGVHTGGPDALSAADKQAFANSLDKWLVRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GQYKIWVDADACPNPIKEILFRAAERKSLPLVLVANQMLRVPPSPYISQVRVGSGFDVA
CCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCHHHEECCCCCCHH
DQYIVNHVEPTHLVITADIPLAAQVIEKGALALNPRGELYTTDNIRQKLTMRDFMEDLRS
HHHHHHCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHHHHHHHHH
SGVHTGGPDALSAADKQAFANSLDKWLVRV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA