| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920050
Identifier: 117920050
GI number: 117920050
Start: 1880733
End: 1880972
Strand: Direct
Name: 117920050
Synonym: Shewana3_1602
Alternate gene names: NA
Gene position: 1880733-1880972 (Clockwise)
Preceding gene: 117920049
Following gene: 117920051
Centisome position: 37.82
GC content: 49.17
Gene sequence:
>240_bases ATGCATAATGTACCGCAAGCGGGTTACATACTATACCACACCGAAGGCTGTCACTTATGTGAACAGGCTGCGGCATTGCT TAATGCCGCCGAGGTGCCTTTTACGGCCATCGATATTTGCGATGATGAAGCCTTAGCTGAACGTTATGGCGTGTGTATTC CCGTGGTGAAGGCCGAGGATGAGCGTTGCCTGTTTTGGCCCTTTGACGCTACCCAATTACAAGAATTTTTAGGAGCTTAG
Upstream 100 bases:
>100_bases TTGGTCAAGATGAAAATCAAGGTGGAAAACATCGATGATCTGACCTTGCCTATGGATTACAAGCGCAATCCCCATATCCA TAATACTTGGTTAATCACCC
Downstream 100 bases:
>100_bases TTTGAGTCTGGTTCGTATCAATAATGGCTCGTTAGCCTATGGTTATACTCCGCTGCTGCAAAATGCCGATTTTACTATCG AGCGCGGCGAGCGAGTGTGT
Product: glutaredoxin 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MHNVPQAGYILYHTEGCHLCEQAAALLNAAEVPFTAIDICDDEALAERYGVCIPVVKAEDERCLFWPFDATQLQEFLGA
Sequences:
>Translated_79_residues MHNVPQAGYILYHTEGCHLCEQAAALLNAAEVPFTAIDICDDEALAERYGVCIPVVKAEDERCLFWPFDATQLQEFLGA >Mature_79_residues MHNVPQAGYILYHTEGCHLCEQAAALLNAAEVPFTAIDICDDEALAERYGVCIPVVKAEDERCLFWPFDATQLQEFLGA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8757; Mature: 8757
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNVPQAGYILYHTEGCHLCEQAAALLNAAEVPFTAIDICDDEALAERYGVCIPVVKAED CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCEEEEEECCC ERCLFWPFDATQLQEFLGA CEEEEECCCHHHHHHHHCC >Mature Secondary Structure MHNVPQAGYILYHTEGCHLCEQAAALLNAAEVPFTAIDICDDEALAERYGVCIPVVKAED CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCEEEEEECCC ERCLFWPFDATQLQEFLGA CEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA