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The map label for this gene is 117920025

Identifier: 117920025

GI number: 117920025

Start: 1846418

End: 1847104

Strand: Direct

Name: 117920025

Synonym: Shewana3_1577

Alternate gene names: NA

Gene position: 1846418-1847104 (Clockwise)

Preceding gene: 117920024

Following gene: 117920027

Centisome position: 37.13

GC content: 52.4

Gene sequence:

>687_bases
ATGGGGCCTTGGTGGGTGAACGTTAAGCTGCGCTGGCGTGCGCTACGCTGCCAGCATCGGCTATTTAAGGATTATTACCA
ATCCTTAGTGCCGCTGTTGGAGTTACCCATTAGTCGGGCGCCCTTAATTGCGATGGATTTGGAGATGACAGGCCTCAACC
CTTTACAGGACCAAATCTTAAGTATTGGGCTAGTGCCGATTGAAAATGGGGCGATTCCCTTGATGGGCGCGCAGCAAAAA
CTGGTGCAAATACAGGGTAGTGTAGGGCAGAGTGCGACCATCCATGGGATCCTCGATAATCATTTAACCGAGGCGGTGAC
GATTGAAGAGGCGATGGCATGGTTTGTGGCTCAAACCCGTGGTCATGTATTGGTCGCGCACCATTCCCCCCTCGATTGCC
GTTTCTTACAGCAAGATATCTTGTCGATTTATCATCAAGCGATTGTACTGCCTGCGATTGATACTCTACTGCTGGAAAAA
CACCGTTTGCTACGCGAACACTCAGTGCTTAAAGAAGGCAGCTTAAGGCTTGGGGCATGCCGAGAACGGTATGGATTGCC
GATATATGGCGCCCACAGCGCCCTGACTGACGCACTGGCCTGCGGCGAACTGTTATTGGCGCAGGTGGCAAGCATGGGCG
GCGCCGATGAGCTAAAGGTGGGGGAATTGTTAGCTTACTCACGCTAA

Upstream 100 bases:

>100_bases
GCCATCTATCTTCTTTGGTGAGGCATCAACTGCGGGATGCGTTTAAGGTGGTCCATGATGCCCAGTCGGGGATGAAGATG
AAATTTATGCGGAGCTTTTA

Downstream 100 bases:

>100_bases
ACGGTGTGTTAGCGCACTAAAGGCTGCGTTTGATCGCCTCTACGCCGAAATCTCTTCTTAGATTGAATTTCTAAATCTGA
TGCATGTCGTTAGAATTGAG

Product: exonuclease, RNase T and DNA polymerase III

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase Exonuclease Activity; DNA Polymerase III Subunit; DNA Polymerase III Epsilon Subunit-Like Protein; DNA Polymerase III; Exonuclease Superfamily; DNA Polymerase; 3-5' Exonuclease; Exonuclase; DNA Polymerase III Epsilon-Subunit Paralog

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQILSIGLVPIENGAIPLMGAQQK
LVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTRGHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEK
HRLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR

Sequences:

>Translated_228_residues
MGPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQILSIGLVPIENGAIPLMGAQQK
LVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTRGHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEK
HRLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR
>Mature_227_residues
GPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQILSIGLVPIENGAIPLMGAQQKL
VQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTRGHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKH
RLLREHSVLKEGSLRLGACRERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25275; Mature: 25144

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQIL
CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH
SIGLVPIENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTR
HCCCEEECCCCEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
GHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
GPWWVNVKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLIAMDLEMTGLNPLQDQIL
CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHH
SIGLVPIENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTR
HCCCEEECCCCEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
GHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RERYGLPIYGAHSALTDALACGELLLAQVASMGGADELKVGELLAYSR
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA