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The map label for this gene is 117919983

Identifier: 117919983

GI number: 117919983

Start: 1791103

End: 1791834

Strand: Direct

Name: 117919983

Synonym: Shewana3_1535

Alternate gene names: NA

Gene position: 1791103-1791834 (Clockwise)

Preceding gene: 117919982

Following gene: 117919986

Centisome position: 36.02

GC content: 48.22

Gene sequence:

>732_bases
ATGACGAAATCCTTAATCAAGATACTGAGCGTTTTACTTTTATGTTCAACTGCTAACGCCTTTGCCGATGAGTTTGCCGA
TAATCTGGGGCTGACCCTGTTGCCTGTCGAACCATCAACTCAGGTAAACGCTGCATCATCCCATACCAAACCACCGCTGG
TGATTTTTTTGAGTGGCGATGGCGGTTGGGCGACCCTTGATAAAGCCGTAGGGGGCATTTTACAGCAGCAGGGCTGGCCT
GTGGTCGGCTGGAGCTCGCTGAAATACTATTGGAAACAAAAAGATCCCAAAGATGTCACCCAAGATACCTTAGCCATAAT
CGACAAGTACCAGGCGGAATTTGGCACGCAAAAAGTGATTTTGATTGGTTATTCCTTTGGGGCCGAAGTTATCCCCTTTG
TGCTAAATGAGATGCCCGCGCGGTATCGGAAGAATGTCTTGGGGGCTGTGCTGCTCTCTCCTTCACAATCCTCGGATTTT
GAAATCCACGTGAGCGAGATGGTCACCTCGGATAATCAATCGGCTCGTTACTTAACCTTGCCCGAAGTGAACAAACAAAC
CACTGTGCCTATGCTTTGCCTCTACGGTAAAGAGGACGATGCGCCGCTGCATTTATGCCCTGAGGTTAAGCAGCCCAATG
TCACTGTGATGGAGTTAAGCGGTGGCCACAGTTTTGACGATGATTACGATAAAGTGGTCAAGTTGATAAAAGGTTGGCTA
AAGCCAAGTTAG

Upstream 100 bases:

>100_bases
TTGATTTGTTATGGCGGGCTATCTTTACCCGTAGTGGTGGGTAGTTTGGTGACCTTAACGAGTCGTGGTGCAACTGGCGT
ATTTAAAAAGTAGGTGCGAG

Downstream 100 bases:

>100_bases
CGCGCTTTAGTGCATGGCCTAATGCTTTGGAATAAAACATAAAAAGGGCGCAGATGCGCCCTTTGTTTTAGGTTGTACTA
CAGCGAATGACTAGAGCTGA

Product: Type IV secretory pathway VirJ component-like protein

Products: NA

Alternate protein names: Virulence Protein; Acid lerance Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Type IV Secretion System VirJ-Like Protein; Acid Virulence Protein B; AcvB-Related Protein; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTKSLIKILSVLLLCSTANAFADEFADNLGLTLLPVEPSTQVNAASSHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWP
VVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDF
EIHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVKLIKGWL
KPS

Sequences:

>Translated_243_residues
MTKSLIKILSVLLLCSTANAFADEFADNLGLTLLPVEPSTQVNAASSHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWP
VVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDF
EIHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVKLIKGWL
KPS
>Mature_242_residues
TKSLIKILSVLLLCSTANAFADEFADNLGLTLLPVEPSTQVNAASSHTKPPLVIFLSGDGGWATLDKAVGGILQQQGWPV
VGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVILIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDFE
IHVSEMVTSDNQSARYLTLPEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVKLIKGWLK
PS

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26734; Mature: 26603

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00435 PEROXIDASE_1 ; PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSLIKILSVLLLCSTANAFADEFADNLGLTLLPVEPSTQVNAASSHTKPPLVIFLSGD
CCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECC
GGWATLDKAVGGILQQQGWPVVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVI
CCHHHHHHHHHHHHHHCCCCEECHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
LIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDFEIHVSEMVTSDNQSARYLTL
EEEECCCHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEC
PEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVKLIKGWL
CCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC
KPS
CCC
>Mature Secondary Structure 
TKSLIKILSVLLLCSTANAFADEFADNLGLTLLPVEPSTQVNAASSHTKPPLVIFLSGD
CHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECC
GGWATLDKAVGGILQQQGWPVVGWSSLKYYWKQKDPKDVTQDTLAIIDKYQAEFGTQKVI
CCHHHHHHHHHHHHHHCCCCEECHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
LIGYSFGAEVIPFVLNEMPARYRKNVLGAVLLSPSQSSDFEIHVSEMVTSDNQSARYLTL
EEEECCCHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCEEEEHHHHHCCCCCCCEEEEC
PEVNKQTTVPMLCLYGKEDDAPLHLCPEVKQPNVTVMELSGGHSFDDDYDKVVKLIKGWL
CCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC
KPS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA