Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919910
Identifier: 117919910
GI number: 117919910
Start: 1696925
End: 1697134
Strand: Direct
Name: 117919910
Synonym: Shewana3_1462
Alternate gene names: NA
Gene position: 1696925-1697134 (Clockwise)
Preceding gene: 117919909
Following gene: 117919914
Centisome position: 34.13
GC content: 47.62
Gene sequence:
>210_bases GTGGGATTCATGTTTTATGTGGTTGTCGCCTTGTCGGTGAGTTGCTCCTGGTGTTTTGGCGTTGCGGCTTTTAGAGTAGG ACTTTCGGTAAGCTATTGGGCTGTAATGGGATTTATACTGGGACCCTTAGCGTTTCCACTGTTTTCCTCCCATAAACGTA TTGCGCTAAGCAGAATGCGCCGAACTTCTGACGCTAGTCTAACCGCTTAA
Upstream 100 bases:
>100_bases TTGCTTAGTGCTGATAAATAGCCTCGCTCAGAGTCTATTTATATTGAGAACGGCTATTTTTTGATTTGCACATAATGGCT TAGCCGATAAAGAGGTTGCT
Downstream 100 bases:
>100_bases TGTTGATATGATTTGTCGTAAATGTGGGCAATAAAAAAGGAGCATAAAGCTCCTTTTTTATTGCCCTAGGCTACGCGCTA GCAAATGGCTCTAGGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MGFMFYVVVALSVSCSWCFGVAAFRVGLSVSYWAVMGFILGPLAFPLFSSHKRIALSRMRRTSDASLTA
Sequences:
>Translated_69_residues MGFMFYVVVALSVSCSWCFGVAAFRVGLSVSYWAVMGFILGPLAFPLFSSHKRIALSRMRRTSDASLTA >Mature_68_residues GFMFYVVVALSVSCSWCFGVAAFRVGLSVSYWAVMGFILGPLAFPLFSSHKRIALSRMRRTSDASLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7572; Mature: 7441
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFMFYVVVALSVSCSWCFGVAAFRVGLSVSYWAVMGFILGPLAFPLFSSHKRIALSRMR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RTSDASLTA HCCCCCCCC >Mature Secondary Structure GFMFYVVVALSVSCSWCFGVAAFRVGLSVSYWAVMGFILGPLAFPLFSSHKRIALSRMR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RTSDASLTA HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA