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The map label for this gene is yajC [H]

Identifier: 117919884

GI number: 117919884

Start: 1665505

End: 1665780

Strand: Direct

Name: yajC [H]

Synonym: Shewana3_1436

Alternate gene names: 117919884

Gene position: 1665505-1665780 (Clockwise)

Preceding gene: 117919883

Following gene: 117919885

Centisome position: 33.5

GC content: 40.94

Gene sequence:

>276_bases
ATGGAATTGATTTTCATGCTGGTGATTTTCGGTCTGATTTTCTATTTCATGATTTTCCGTCCGCAATCTAAGCGTGTTAA
AGAGCACAAGAACCTGATGTCATCTTTAACCAAGGGCGACGAAGTCCTGACCAGCGGCGGTATCTTAGGTAAGATTGCAA
AGATCAGCGATGAAAATGACTACGTGTTACTGAGCTTGAACGACACGACTCAAATTACAATTAAAAAAGATTACATTGCA
GCTGTATTGCCTAAGGGCTCTATCCAGTCGTTGTAA

Upstream 100 bases:

>100_bases
CAGAGTTAGTCGATTGATTTTTTGCTAATAAGAAGAGAAAACTATGTTCATTTCAAATGCATATGCAAATGCTGCAGGCG
CTCCACAGGGTGGCGGCACC

Downstream 100 bases:

>100_bases
GCCAAGAGGGCTCAGGCGTGTTAAATAAATACCCAATGTGGAAAAACATTATGGTGGTGCTCGTCATCGCCATAGGTTGT
TTCTATGCCGTACCTAACCT

Product: protein translocase subunit yajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLTKGDEVLTSGGILGKIAKISDENDYVLLSLNDTTQITIKKDYIA
AVLPKGSIQSL

Sequences:

>Translated_91_residues
MELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLTKGDEVLTSGGILGKIAKISDENDYVLLSLNDTTQITIKKDYIA
AVLPKGSIQSL
>Mature_91_residues
MELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLTKGDEVLTSGGILGKIAKISDENDYVLLSLNDTTQITIKKDYIA
AVLPKGSIQSL

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=91, Percent_Identity=62.6373626373626, Blast_Score=132, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 10240; Mature: 10240

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLTKGDEVLTSGGILGKIAKISDEND
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHECCCCCEEEEEEECCCCC
YVLLSLNDTTQITIKKDYIAAVLPKGSIQSL
EEEEEECCCEEEEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MELIFMLVIFGLIFYFMIFRPQSKRVKEHKNLMSSLTKGDEVLTSGGILGKIAKISDEND
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHECCCCCEEEEEEECCCCC
YVLLSLNDTTQITIKKDYIAAVLPKGSIQSL
EEEEEECCCEEEEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]